Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
MED28Q9H204 RNU6-1123P-201ENST00000362347 106 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 RNU6-562P-201ENST00000362731 107 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 SNORA33-201ENST00000363664 130 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 SNORA18.2-201ENST00000383865 132 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
MED28Q9H204 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 MIR1283-1-201ENST00000408494 87 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 RNU4-62P-201ENST00000410125 130 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 RNU4-46P-201ENST00000410818 138 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 SNRPEP10-201ENST00000420249 274 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.71□□□□□ -2.3
MED28Q9H204 AL354692.1-201ENST00000423044 315 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.71□□□□□ -2.3
MED28Q9H204 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.71□□□□□ -2.3
MED28Q9H204 RNU7-182P-201ENST00000459009 62 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.71□□□□□ -2.3
MED28Q9H204 HMGN1P12-201ENST00000499125 195 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 ARL2BPP4-201ENST00000506854 471 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 RNU2-69P-201ENST00000516061 100 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 SNORD27.1-201ENST00000516319 72 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.71□□□□□ -2.3
MED28Q9H204 AP003072.2-201ENST00000527756 676 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 DEFB131C-201ENST00000528817 165 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.71□□□□□ -2.3
MED28Q9H204 AC136932.1-201ENST00000574771 208 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.71□□□□□ -2.3
MED28Q9H204 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.71□□□□□ -2.3
MED28Q9H204 SNORA72.2-201ENST00000365028 127 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 RNU6-434P-201ENST00000384376 107 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 SNORD70.1-201ENST00000391007 85 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 RNU6-482P-201ENST00000391068 107 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 RNU6-1093P-201ENST00000391194 107 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 AP1B1P2-201ENST00000416196 106 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.7□□□□□ -2.3
MED28Q9H204 GPR143P-201ENST00000434155 205 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.7□□□□□ -2.3
MED28Q9H204 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.7□□□□□ -2.3
MED28Q9H204 HSPE1P13-201ENST00000451143 297 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.7□□□□□ -2.3
MED28Q9H204 FABP5P5-201ENST00000515537 406 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 AC002044.1-201ENST00000606707 158 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 AC009509.4-201ENST00000619202 509 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 SEPT14P19-203ENST00000633205 211 ntBASIC0.7□□□□□ -2.3
MED28Q9H204 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.7□□□□□ -2.3
MED28Q9H204 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
MED28Q9H204 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
MED28Q9H204 RNU6-1029P-201ENST00000384109 107 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 SNORA16.2-201ENST00000390991 127 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 SNORA17.3-201ENST00000391159 129 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC090960.1-201ENST00000421072 306 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC010099.3-201ENST00000423896 409 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.69□□□□□ -2.3
MED28Q9H204 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.69□□□□□ -2.3
MED28Q9H204 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.69□□□□□ -2.3
MED28Q9H204 AC010486.2-201ENST00000505572 483 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.69□□□□□ -2.3
MED28Q9H204 RNU6-948P-201ENST00000516374 107 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 SNORA70.22-201ENST00000517160 124 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 SUMO2P16-201ENST00000519475 264 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.69□□□□□ -2.3
MED28Q9H204 AC015712.3-201ENST00000559380 164 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC008088.1-201ENST00000580993 280 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 MIR4753-201ENST00000585119 83 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AL022161.1-201ENST00000604390 213 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AL157834.3-201ENST00000615543 103 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AL353997.5-201ENST00000618886 171 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 AC022306.3-201ENST00000619930 550 ntBASIC0.69□□□□□ -2.3
MED28Q9H204 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.69□□□□□ -2.3
MED28Q9H204 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.69□□□□□ -2.3
MED28Q9H204 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
MED28Q9H204 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
MED28Q9H204 snoU2-30.2-201ENST00000362805 70 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 RNY4P34-201ENST00000364779 95 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 MIR19B1-201ENST00000384829 87 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 RPS3AP3-201ENST00000411933 242 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AP000275.1-201ENST00000411943 390 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.68□□□□□ -2.3
MED28Q9H204 HMGN2P34-201ENST00000437647 269 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.68□□□□□ -2.3
MED28Q9H204 RPS4XP11-201ENST00000446897 772 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AC016717.1-201ENST00000448918 286 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.68□□□□□ -2.3
MED28Q9H204 RPL39P38-201ENST00000467018 153 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AC079140.5-201ENST00000507882 310 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.68□□□□□ -2.3
MED28Q9H204 MTCO3P23-201ENST00000561363 289 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 TPRKBP2-201ENST00000565969 475 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 AGGF1P4-201ENST00000568249 801 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.68□□□□□ -2.3
MED28Q9H204 MIR4661-201ENST00000582720 75 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 RSL24D1P11-201ENST00000591045 491 ntBASIC0.68□□□□□ -2.3
MED28Q9H204 MIR378A-201ENST00000362177 66 ntBASIC0.67□□□□□ -2.3
MED28Q9H204 RNU6-266P-201ENST00000364225 107 ntBASIC0.67□□□□□ -2.3
MED28Q9H204 RNU6-1127P-201ENST00000384580 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms