Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 Y_RNA.456-201ENST00000384232 111 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 U3.26-201ENST00000391236 204 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 AC006199.1-201ENST00000548728 219 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 MIR3160-1-201ENST00000577972 85 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 MIR4724-201ENST00000579485 89 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 AC090897.2-201ENST00000581715 130 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 AC244205.2-202ENST00000635781 342 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 U3.9-201ENST00000363823 204 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 U8.7-201ENST00000364940 136 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AL512604.1-201ENST00000404812 257 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AL591034.1-201ENST00000407447 340 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 RNU4-43P-201ENST00000410628 137 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AC092017.2-201ENST00000427600 362 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 MTCO1P44-201ENST00000441935 243 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 SNORD108-201ENST00000459332 71 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AL451007.1-201ENST00000595491 289 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AL670379.3-201ENST00000605040 251 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 MIR6868-201ENST00000611215 58 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 XIST_intron.1-201ENST00000619444 68 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUCKS1Q9H1E3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 MIR367-201ENST00000362299 68 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-884P-201ENST00000363889 107 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNA5SP399-201ENST00000364003 117 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.280-201ENST00000364765 112 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 SNORD87-201ENST00000364849 89 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNU1-64P-201ENST00000365443 163 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-622P-201ENST00000384272 103 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.584-201ENST00000391090 114 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-1197P-201ENST00000391183 107 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RPL21P65-201ENST00000406094 466 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNA5SP390-201ENST00000410191 113 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-581P-201ENST00000516214 105 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 MIR2116-201ENST00000517221 80 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 AC090142.3-201ENST00000519012 385 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 AL162713.1-201ENST00000604480 262 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 SNORD98-201ENST00000636377 67 ntBASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NUCKS1Q9H1E3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.369-201ENST00000365568 117 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 MIR1193-201ENST00000408109 78 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 MIR1302-4-201ENST00000408701 150 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 RNU2-37P-201ENST00000410695 177 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.630-201ENST00000411370 108 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AL117339.2-201ENST00000430475 180 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC012308.1-201ENST00000451232 178 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.651-201ENST00000459380 103 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-1282P-201ENST00000516735 96 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC120024.3-201ENST00000603167 156 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 MIR8058-201ENST00000615737 89 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AL591926.4-201ENST00000616895 298 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC039056.2-201ENST00000622261 511 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AC008555.8-201ENST00000623602 2168 ntBASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.35-201ENST00000362601 101 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 RNU1-18P-201ENST00000363062 164 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 RNA5SP283-201ENST00000365604 119 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-597P-201ENST00000365620 102 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-144P-201ENST00000383951 107 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.495-201ENST00000384435 112 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 SNORD116-21-201ENST00000384507 92 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 SNORA48.5-201ENST00000391143 135 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 EI24P2-201ENST00000397776 1076 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-383P-201ENST00000410864 94 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 AC004866.1-201ENST00000411748 78 ntBASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.23□□□□□ -1.73
NUCKS1Q9H1E3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms