Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC019205.3-201ENST00000424573 156 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC243964.1-201ENST00000441814 261 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC016700.2-201ENST00000446011 156 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.52□□□□□ -2.33
TRIM4Q9C037 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.52□□□□□ -2.33
TRIM4Q9C037 SNRPGP7-201ENST00000469016 106 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 TRBVB-201ENST00000477100 408 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC015911.1-201ENST00000495111 156 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.52□□□□□ -2.33
TRIM4Q9C037 RNU7-51P-201ENST00000516560 62 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 RNU5F-4P-201ENST00000516581 114 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 RNU6-856P-201ENST00000516959 98 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC025423.5-201ENST00000550230 219 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 MIR4802-201ENST00000581881 80 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC105148.1-201ENST00000604961 409 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AP002360.4-201ENST00000606980 481 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC136475.10-201ENST00000620253 385 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 U4.7-201ENST00000638126 106 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 RNY4P24-201ENST00000362735 96 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 RNU6-371P-201ENST00000364283 108 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 RNU6-534P-201ENST00000364877 106 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 RNU6-877P-201ENST00000383868 107 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 Y_RNA.465-201ENST00000384293 102 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 MIR200A-201ENST00000384875 90 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 SNORD12-201ENST00000391002 90 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 RNU6-1245P-201ENST00000411130 106 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 RNA5SP111-201ENST00000411386 101 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 HIGD1AP15-201ENST00000416198 280 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 RPL22P18-201ENST00000417197 377 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC060773.1-201ENST00000421698 310 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC011233.1-201ENST00000422812 283 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 MTND1P32-201ENST00000433043 938 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC004854.1-201ENST00000440356 349 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.51□□□□□ -2.33
TRIM4Q9C037 AC090888.2-201ENST00000559765 1144 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.51□□□□□ -2.33
TRIM4Q9C037 RNU6-1192P-201ENST00000612197 107 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 RNU6-489P-201ENST00000618289 107 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 MIR6759-201ENST00000638110 65 ntBASIC0.51□□□□□ -2.33
TRIM4Q9C037 MTND4P14-201ENST00000435799 1354 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TRIM4Q9C037 U3.9-201ENST00000363823 204 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 RNU6-43P-201ENST00000384302 107 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 RPS20P2-201ENST00000402520 389 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 EEF1A1P40-201ENST00000412883 573 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 AL353777.1-201ENST00000425552 326 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 AP000797.1-201ENST00000478870 387 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 AL163973.1-201ENST00000484753 577 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 AC011406.1-201ENST00000512440 370 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 SNORD79.1-201ENST00000516069 84 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.5□□□□□ -2.33
TRIM4Q9C037 MIR4307-201ENST00000582802 84 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 AL353149.1-201ENST00000610667 244 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 Z69720.2-201ENST00000624755 279 ntBASIC0.5□□□□□ -2.33
TRIM4Q9C037 AC099786.3-201ENST00000565735 1410 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
TRIM4Q9C037 AC073343.1-201ENST00000328239 651 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 SNORD116.1-201ENST00000365628 92 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 RNU6-1026P-201ENST00000384465 108 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
TRIM4Q9C037 RNU6-1054P-201ENST00000411293 104 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 AC114491.1-201ENST00000416095 246 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.49□□□□□ -2.33
TRIM4Q9C037 RPL23AP95-201ENST00000426806 265 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 AC244670.1-201ENST00000436879 112 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.49□□□□□ -2.33
TRIM4Q9C037 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.49□□□□□ -2.33
TRIM4Q9C037 COX6CP6-201ENST00000490840 228 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 HMGN1P12-201ENST00000499125 195 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TRIM4Q9C037 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.49□□□□□ -2.33
TRIM4Q9C037 AP001893.2-201ENST00000526949 202 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 AC068790.6-201ENST00000602558 258 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 AL139286.2-201ENST00000606838 396 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 AC006927.4-201ENST00000639187 543 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
TRIM4Q9C037 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TRIM4Q9C037 RNU6-1141P-201ENST00000364520 107 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 RNU4-56P-201ENST00000364700 142 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 Y_RNA.363-201ENST00000365529 113 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 MIR942-201ENST00000401111 86 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 C1DP2-201ENST00000418167 426 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 MTND2P9-201ENST00000422293 931 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC010975.2-201ENST00000427781 588 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 CALM2P2-201ENST00000428512 440 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 CETN4P-201ENST00000432407 469 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC007547.1-201ENST00000462177 490 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 BET1P1-201ENST00000482276 359 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 RNU6-201P-201ENST00000517100 61 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.48□□□□□ -2.33
TRIM4Q9C037 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 MIR5697-201ENST00000578045 78 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms