Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU7-14P-201ENST00000459331 62 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AC104982.1-201ENST00000478775 574 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AC117522.1-201ENST00000509821 380 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AC112206.4-201ENST00000515142 405 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AP001893.2-201ENST00000526949 202 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AC004812.1-201ENST00000540773 146 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AC008147.4-201ENST00000617570 1204 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 AL157786.1-207ENST00000627771 695 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 MIR5087-201ENST00000635826 76 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 RNU6-931P-201ENST00000363850 107 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 MIR100-201ENST00000385259 80 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC114491.1-201ENST00000416095 246 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AL590135.1-201ENST00000422215 156 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC019205.3-201ENST00000424573 156 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 USP9YP14-201ENST00000430663 563 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC016700.2-201ENST00000446011 156 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC015911.1-201ENST00000495111 156 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 SNORA31.4-201ENST00000516049 129 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 RNU6-1098P-201ENST00000516772 96 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 RNU6-685P-201ENST00000517088 95 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 RNU6-165P-201ENST00000517170 99 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC136628.3-201ENST00000521868 290 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AP003484.1-201ENST00000530974 250 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC008521.1-201ENST00000587471 187 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AL512605.2-201ENST00000592972 256 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 AC013244.3-201ENST00000605614 388 ntBASIC0.75□□□□□ -2.29
UPF3BQ9BZI7 MIR200A-201ENST00000384875 90 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 RNU6-1000P-201ENST00000391066 106 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AC010099.3-201ENST00000423896 409 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 RAB28P5-201ENST00000427490 651 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AC010975.2-201ENST00000427781 588 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AC073910.1-201ENST00000445047 438 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 RNU5F-4P-201ENST00000516581 114 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 CTHRC1P1-201ENST00000605383 469 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AC105129.3-201ENST00000605455 485 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AC005520.5-201ENST00000613926 164 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 AC013437.2-201ENST00000639587 677 ntBASIC0.74□□□□□ -2.29
UPF3BQ9BZI7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 Y_RNA.132-201ENST00000363421 102 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 SNORA24.1-201ENST00000384401 135 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 RNU6-950P-201ENST00000384651 107 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 MIR558-201ENST00000384920 94 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 RNU2-39P-201ENST00000410604 198 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 RNU6-733P-201ENST00000410759 104 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 CALM2P2-201ENST00000428512 440 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 AL133396.1-201ENST00000432048 687 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 RPL22P17-201ENST00000438729 315 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 RNU6-377P-201ENST00000515965 102 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 RNU6-567P-201ENST00000516746 107 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 AC090888.2-201ENST00000559765 1144 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 SNORA59B-202ENST00000578183 701 ntBASIC0.73□□□□□ -2.29
UPF3BQ9BZI7 MTND4P16-201ENST00000466108 1367 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 RNA5SP259-201ENST00000365541 109 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 RPL37P21-201ENST00000435890 276 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 RPS24P1-201ENST00000438550 371 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 AC013470.1-201ENST00000453438 462 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 AC011406.1-201ENST00000512440 370 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 RNU6-1041P-201ENST00000516254 102 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 AL158042.1-201ENST00000605338 460 ntBASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
UPF3BQ9BZI7 MTND4P12-201ENST00000498999 1377 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 Y_RNA.97-201ENST00000363094 102 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 RNU4-68P-201ENST00000364314 141 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 SNORA4.2-201ENST00000365313 147 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 RNU6-1026P-201ENST00000384465 108 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 RNU6-293P-201ENST00000411259 106 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 RPL23AP95-201ENST00000426806 265 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC000111.3-201ENST00000433478 193 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC002486.1-201ENST00000435098 391 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 RPS23P5-201ENST00000495419 428 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC112204.1-201ENST00000502591 103 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC105313.1-201ENST00000509121 353 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 MTND3P25-201ENST00000509243 135 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC074344.1-201ENST00000512823 224 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC104136.1-201ENST00000512969 394 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 AC004817.2-201ENST00000561794 651 ntBASIC0.71□□□□□ -2.3
UPF3BQ9BZI7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms