Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 AC026371.1-201ENST00000551867 419 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 MIR1273C-201ENST00000578669 77 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 AL079343.1-201ENST00000572358 1771 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 RNU4-15P-201ENST00000362613 141 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 RNA5SP331-201ENST00000364986 107 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 RNU6-817P-201ENST00000391083 104 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 AC104332.1-201ENST00000440471 797 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 RNU7-136P-201ENST00000458819 69 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 SNORA14.1-201ENST00000516113 141 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 SNORA76.2-201ENST00000517095 137 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 AC027419.1-201ENST00000522976 328 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 AC005332.6-201ENST00000613178 446 ntBASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
SCAPERQ9BY12 RNU4-48P-201ENST00000365559 182 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RNU6-43P-201ENST00000384302 107 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RNU6-39P-201ENST00000384344 107 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RNU1-86P-201ENST00000516108 154 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RNU1-107P-201ENST00000516617 154 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 MTND1P36-201ENST00000522384 936 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 BNIP3P26-201ENST00000600827 554 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AL353778.1-201ENST00000603149 408 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RPL21P136-201ENST00000605378 396 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AP000676.3-201ENST00000623299 569 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RNU4-76P-201ENST00000364509 141 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 SNORD31B-201ENST00000364977 69 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 MTND1P20-201ENST00000430341 950 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AL162725.1-201ENST00000435405 301 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RPS29P8-201ENST00000445109 171 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RNU6-953P-201ENST00000459154 107 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AC010531.2-201ENST00000465012 153 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AC091874.1-201ENST00000511402 339 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AC090049.2-201ENST00000550377 109 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AL157871.3-201ENST00000557231 293 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 MIR4764-201ENST00000580680 88 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AC131055.1-201ENST00000584626 316 ntBASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.3□□□□□ -2.46
SCAPERQ9BY12 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 RNU6-877P-201ENST00000383868 107 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 RNU6-815P-201ENST00000384080 113 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 FCF1P10-201ENST00000407590 479 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 RN7SKP142-201ENST00000411236 328 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 MTND2P20-201ENST00000440805 661 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC007000.2-201ENST00000442564 487 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 ART2BP-201ENST00000453501 499 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC245047.8-201ENST00000456455 284 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC006026.2-201ENST00000457376 180 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC016925.1-201ENST00000458303 298 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 MTND2P7-201ENST00000521337 640 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 MTND1P15-201ENST00000579262 949 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AC010975.3-201ENST00000618727 978 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AL031667.3-201ENST00000620124 655 ntBASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.31□□□□□ -2.46
SCAPERQ9BY12 AL390237.1-201ENST00000404226 1415 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 MIR520F-201ENST00000384824 87 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AL451046.2-201ENST00000403074 277 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 MTCYBP10-201ENST00000424905 650 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC073261.1-201ENST00000429409 121 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 MTCO1P19-201ENST00000443487 500 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC104563.1-201ENST00000476147 376 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 HMGB1P29-201ENST00000505659 499 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 RNU6-856P-201ENST00000516959 98 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC109810.1-201ENST00000534066 224 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC078938.1-201ENST00000620993 318 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 AC011155.2-201ENST00000623202 216 ntBASIC-0.32□□□□□ -2.46
SCAPERQ9BY12 SNORD56.1-201ENST00000362913 68 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 RNU6-701P-201ENST00000384059 107 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 AL079342.2-201ENST00000403367 482 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 AC027644.1-201ENST00000419595 298 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 MTCO2P34-201ENST00000421994 607 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 AC010154.1-201ENST00000425857 269 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 RNU7-59P-201ENST00000459101 61 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 HMGB1P28-201ENST00000507778 552 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms