Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-37P-201ENST00000362692 107 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-562P-201ENST00000362731 107 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 snoU2-30.2-201ENST00000362805 70 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-11P-201ENST00000364234 107 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU1-133P-201ENST00000364867 167 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-418P-201ENST00000384035 107 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-16P-201ENST00000384385 107 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-1026P-201ENST00000384465 108 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC013470.1-201ENST00000453438 462 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC116353.3-201ENST00000511215 249 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 SNORA70.12-201ENST00000516084 153 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-496P-201ENST00000516145 99 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-123P-201ENST00000516163 102 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 RNU6-948P-201ENST00000516374 107 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 SNORA31.10-201ENST00000516482 106 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 SNORA62.5-201ENST00000516634 120 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.19□□□□□ -2.38
LIMD2Q9BT23 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC123904.2-201ENST00000548059 300 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 TMF1P1-201ENST00000576058 373 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC025627.3-201ENST00000582078 182 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 MIR4307-201ENST00000582802 84 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC064807.4-201ENST00000607201 407 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC093913.1-201ENST00000614178 329 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AP000943.4-201ENST00000622912 357 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC097372.5-201ENST00000623665 376 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AC126544.2-201ENST00000625174 749 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 AL450472.1-202ENST00000637286 180 ntBASIC0.19□□□□□ -2.38
LIMD2Q9BT23 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.19□□□□□ -2.38
LIMD2Q9BT23 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
LIMD2Q9BT23 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AC009541.1-201ENST00000438279 2662 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 RNU6-378P-201ENST00000384324 107 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 SNORD41-201ENST00000386967 70 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 RPS29P13-201ENST00000402041 169 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 RN7SKP200-201ENST00000410564 320 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 HMGN2P34-201ENST00000437647 269 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 U7.7-201ENST00000459276 60 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 snoU13.18-201ENST00000459483 104 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 RNU6-1146P-201ENST00000516282 102 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 RNU6-567P-201ENST00000516746 107 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AC090049.2-201ENST00000550377 109 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AL137100.2-201ENST00000555786 315 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.18□□□□□ -2.38
LIMD2Q9BT23 MIR3118-1-201ENST00000581787 76 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AL606834.3-201ENST00000602615 496 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AC112187.2-201ENST00000604345 283 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 Z98751.3-201ENST00000604447 521 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AL158032.1-201ENST00000605401 106 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 AL356596.1-201ENST00000624230 379 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 MIR6516-201ENST00000630554 81 ntBASIC0.18□□□□□ -2.38
LIMD2Q9BT23 Y_RNA.122-201ENST00000363331 96 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 SNORA33-201ENST00000363664 130 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RNY4P16-201ENST00000364768 94 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RNU6-1237P-201ENST00000384777 107 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 SNORA16.2-201ENST00000390991 127 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RNA5SP109-201ENST00000391010 116 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RNU1-119P-201ENST00000391122 165 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RNU6-293P-201ENST00000411259 106 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC114491.1-201ENST00000416095 246 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC007283.2-201ENST00000424739 197 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 HSFY7P-201ENST00000432672 318 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 HSFY8P-201ENST00000437934 318 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RPEP5-201ENST00000441137 268 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC233266.1-201ENST00000454518 96 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC022364.2-201ENST00000457963 554 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AP000797.1-201ENST00000478870 387 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC117522.1-201ENST00000509821 380 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RNU6-377P-201ENST00000515965 102 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 RNU6-922P-201ENST00000516753 99 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC109479.2-201ENST00000517842 174 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC106038.2-201ENST00000520706 568 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC013828.2-201ENST00000532487 235 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC078795.3-201ENST00000602913 472 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AL592221.1-201ENST00000605266 382 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC242852.1-201ENST00000612151 96 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC007742.2-201ENST00000618226 398 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AL136221.1-201ENST00000621449 509 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AC244015.1-201ENST00000622301 99 ntBASIC0.17□□□□□ -2.38
LIMD2Q9BT23 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.17□□□□□ -2.38
LIMD2Q9BT23 AL589743.1-201ENST00000551932 2712 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 RNU6-692P-201ENST00000384496 107 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 SNORD89-201ENST00000390981 114 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms