Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
NDNQ99608 RNU6-273P-201ENST00000516937 96 ntBASIC2.04□□□□□ -2.08
NDNQ99608 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.04□□□□□ -2.08
NDNQ99608 EIF4A1P12-201ENST00000551910 141 ntBASIC2.04□□□□□ -2.08
NDNQ99608 AC026271.5-201ENST00000577873 130 ntBASIC2.04□□□□□ -2.08
NDNQ99608 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
NDNQ99608 Y_RNA.783-201ENST00000613546 102 ntBASIC2.04□□□□□ -2.08
NDNQ99608 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
NDNQ99608 AC064859.1-201ENST00000624741 174 ntBASIC2.04□□□□□ -2.08
NDNQ99608 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
NDNQ99608 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
NDNQ99608 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NDNQ99608 Y_RNA.160-201ENST00000363677 92 ntBASIC2.03□□□□□ -2.08
NDNQ99608 Y_RNA.279-201ENST00000364763 95 ntBASIC2.03□□□□□ -2.08
NDNQ99608 RNU6-596P-201ENST00000365395 98 ntBASIC2.03□□□□□ -2.08
NDNQ99608 RNU6-26P-201ENST00000383985 107 ntBASIC2.03□□□□□ -2.08
NDNQ99608 RNU6-876P-201ENST00000391295 104 ntBASIC2.03□□□□□ -2.08
NDNQ99608 SNORA3.2-201ENST00000408221 125 ntBASIC2.03□□□□□ -2.08
NDNQ99608 EIF4EP2-201ENST00000422816 654 ntBASIC2.03□□□□□ -2.08
NDNQ99608 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.03□□□□□ -2.08
NDNQ99608 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.08
NDNQ99608 SNORA4.4-201ENST00000515921 135 ntBASIC2.03□□□□□ -2.08
NDNQ99608 RNU1-54P-201ENST00000517181 120 ntBASIC2.03□□□□□ -2.08
NDNQ99608 HSPE1P18-201ENST00000517602 280 ntBASIC2.03□□□□□ -2.08
NDNQ99608 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.03□□□□□ -2.08
NDNQ99608 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.03□□□□□ -2.08
NDNQ99608 MIR4790-201ENST00000577799 79 ntBASIC2.03□□□□□ -2.08
NDNQ99608 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.03□□□□□ -2.08
NDNQ99608 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.03□□□□□ -2.08
NDNQ99608 AC137590.2-201ENST00000619709 240 ntBASIC2.03□□□□□ -2.08
NDNQ99608 AL162373.1-201ENST00000620433 407 ntBASIC2.03□□□□□ -2.08
NDNQ99608 AC233981.2-201ENST00000611524 1614 ntBASIC2.02□□□□□ -2.09
NDNQ99608 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NDNQ99608 RNU6-1159P-201ENST00000362933 107 ntBASIC2.02□□□□□ -2.09
NDNQ99608 RNU6-378P-201ENST00000384324 107 ntBASIC2.02□□□□□ -2.09
NDNQ99608 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
NDNQ99608 RNA5SP494-201ENST00000410653 129 ntBASIC2.02□□□□□ -2.09
NDNQ99608 RPS26P42-201ENST00000413485 326 ntBASIC2.02□□□□□ -2.09
NDNQ99608 RPL21P111-201ENST00000418453 477 ntBASIC2.02□□□□□ -2.09
NDNQ99608 Z98742.3-201ENST00000418637 326 ntBASIC2.02□□□□□ -2.09
NDNQ99608 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.02□□□□□ -2.09
NDNQ99608 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.02□□□□□ -2.09
NDNQ99608 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.02□□□□□ -2.09
NDNQ99608 AC005741.1-201ENST00000511094 432 ntBASIC2.02□□□□□ -2.09
NDNQ99608 Y_RNA.682-201ENST00000516457 100 ntBASIC2.02□□□□□ -2.09
NDNQ99608 RNU6-965P-201ENST00000516721 96 ntBASIC2.02□□□□□ -2.09
NDNQ99608 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.02□□□□□ -2.09
NDNQ99608 AP000889.1-201ENST00000530968 660 ntBASIC2.02□□□□□ -2.09
NDNQ99608 AC109446.1-201ENST00000566172 220 ntBASIC2.02□□□□□ -2.09
NDNQ99608 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
NDNQ99608 RBM11P1-201ENST00000604951 799 ntBASIC2.02□□□□□ -2.09
NDNQ99608 AP000654.2-201ENST00000605633 586 ntBASIC2.02□□□□□ -2.09
NDNQ99608 AC009994.1-201ENST00000606889 253 ntBASIC2.02□□□□□ -2.09
NDNQ99608 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.02□□□□□ -2.09
NDNQ99608 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
NDNQ99608 RNU6-845P-201ENST00000362578 103 ntBASIC2.01□□□□□ -2.09
NDNQ99608 SNORD50.1-201ENST00000362987 71 ntBASIC2.01□□□□□ -2.09
NDNQ99608 Y_RNA.166-201ENST00000363730 102 ntBASIC2.01□□□□□ -2.09
NDNQ99608 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
NDNQ99608 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NDNQ99608 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
NDNQ99608 SNORA40.19-201ENST00000390846 128 ntBASIC2.01□□□□□ -2.09
NDNQ99608 MIR208B-201ENST00000401172 77 ntBASIC2.01□□□□□ -2.09
NDNQ99608 RNA5SP508-201ENST00000411327 119 ntBASIC2.01□□□□□ -2.09
NDNQ99608 RNA5SP270-201ENST00000411361 118 ntBASIC2.01□□□□□ -2.09
NDNQ99608 SRIP3-201ENST00000413200 219 ntBASIC2.01□□□□□ -2.09
NDNQ99608 AC074085.1-201ENST00000413598 418 ntBASIC2.01□□□□□ -2.09
NDNQ99608 AL137159.1-201ENST00000452808 512 ntBASIC2.01□□□□□ -2.09
NDNQ99608 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.01□□□□□ -2.09
NDNQ99608 IGKV3-31-201ENST00000523109 329 ntBASIC2.01□□□□□ -2.09
NDNQ99608 MRPS36P4-201ENST00000534436 298 ntBASIC2.01□□□□□ -2.09
NDNQ99608 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.01□□□□□ -2.09
NDNQ99608 AC008749.1-201ENST00000597650 306 ntBASIC2.01□□□□□ -2.09
NDNQ99608 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.01□□□□□ -2.09
NDNQ99608 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
NDNQ99608 AC099654.14-201ENST00000638599 341 ntBASIC2.01□□□□□ -2.09
NDNQ99608 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
NDNQ99608 AP006437.1-201ENST00000641440 3685 ntBASIC2□□□□□ -2.09
NDNQ99608 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
NDNQ99608 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NDNQ99608 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NDNQ99608 RNU6-593P-201ENST00000364716 112 ntBASIC2□□□□□ -2.09
NDNQ99608 SNORA12-201ENST00000391162 147 ntBASIC2□□□□□ -2.09
NDNQ99608 RNU6-1093P-201ENST00000391194 107 ntBASIC2□□□□□ -2.09
NDNQ99608 MIR548K-201ENST00000408406 116 ntBASIC2□□□□□ -2.09
NDNQ99608 DPH3P2-201ENST00000422618 250 ntBASIC2□□□□□ -2.09
NDNQ99608 AC096638.1-201ENST00000444678 216 ntBASIC2□□□□□ -2.09
NDNQ99608 AC245102.2-201ENST00000448956 180 ntBASIC2□□□□□ -2.09
NDNQ99608 AL353705.4-201ENST00000449661 238 ntBASIC2□□□□□ -2.09
NDNQ99608 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2□□□□□ -2.09
NDNQ99608 MTND5P5-201ENST00000503764 376 ntBASIC2□□□□□ -2.09
NDNQ99608 RNU7-193P-201ENST00000516723 65 ntBASIC2□□□□□ -2.09
NDNQ99608 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2□□□□□ -2.09
NDNQ99608 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2□□□□□ -2.09
NDNQ99608 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2□□□□□ -2.09
NDNQ99608 AC233702.2-202ENST00000562547 291 ntBASIC2□□□□□ -2.09
NDNQ99608 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
NDNQ99608 MIR6128-201ENST00000615528 109 ntBASIC2□□□□□ -2.09
NDNQ99608 AC022306.2-201ENST00000617563 647 ntBASIC2□□□□□ -2.09
NDNQ99608 MIR1248-201ENST00000629190 106 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms