Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL356157.2-201ENST00000605122 111 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
NEK1Q96PY6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NEK1Q96PY6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NEK1Q96PY6 CBX3P1-201ENST00000325243 554 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 RNU4-52P-201ENST00000384209 138 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 SNORA26.9-201ENST00000391322 122 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
NEK1Q96PY6 HMGB3P2-201ENST00000411913 584 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 AL590556.1-201ENST00000423231 483 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 PCMTD1P1-201ENST00000455560 355 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 RPS29P27-201ENST00000463711 170 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 HMGB1P35-201ENST00000503360 598 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 AC114801.2-201ENST00000503825 781 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 AC016632.1-201ENST00000503994 196 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 SNORA31.16-201ENST00000516773 139 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 MIR4498-201ENST00000577599 66 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 AL034555.1-201ENST00000604816 211 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 MIR3976-201ENST00000606807 139 ntBASIC2.33□□□□□ -2.04
NEK1Q96PY6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.33□□□□□ -2.04
NEK1Q96PY6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 Y_RNA.123-201ENST00000363338 102 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 MT-TL1-201ENST00000386347 75 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 AL591034.2-201ENST00000402839 359 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 AC078809.1-201ENST00000427601 140 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 Z82205.1-201ENST00000428456 297 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 AL133396.1-201ENST00000432048 687 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 RNU6-329P-201ENST00000459618 107 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.32□□□□□ -2.04
NEK1Q96PY6 AC068781.1-201ENST00000488231 618 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 AC104564.1-201ENST00000493028 407 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.32□□□□□ -2.04
NEK1Q96PY6 MTCO2P30-201ENST00000503662 364 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 RNU6-566P-201ENST00000516790 107 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.32□□□□□ -2.04
NEK1Q96PY6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.32□□□□□ -2.04
NEK1Q96PY6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.32□□□□□ -2.04
NEK1Q96PY6 SDR42E1P4-201ENST00000620894 481 ntBASIC2.32□□□□□ -2.04
NEK1Q96PY6 Y_RNA.72-201ENST00000362894 103 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 RNU1-23P-201ENST00000363361 144 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 RNU4-56P-201ENST00000364700 142 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 SNORA36A-201ENST00000384221 132 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 RNU1-148P-201ENST00000384472 162 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 RN7SKP61-201ENST00000410642 295 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 RPL23AP95-201ENST00000426806 265 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.31□□□□□ -2.04
NEK1Q96PY6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC007677.1-201ENST00000445757 515 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC055731.1-201ENST00000474387 401 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC022447.4-201ENST00000504053 364 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.31□□□□□ -2.04
NEK1Q96PY6 PRDX4P1-201ENST00000507189 574 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.31□□□□□ -2.04
NEK1Q96PY6 Y_RNA.682-201ENST00000516457 100 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 RNA5SP454-201ENST00000517231 127 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.31□□□□□ -2.04
NEK1Q96PY6 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 CPDP1-201ENST00000579660 283 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 MIR4742-201ENST00000581069 85 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 MIR3136-201ENST00000583498 78 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC011494.1-201ENST00000596454 237 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC008749.1-201ENST00000597650 306 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AC019193.3-201ENST00000609144 554 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEK1Q96PY6 MTND4P1-201ENST00000457501 1466 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 KPNA2P1-201ENST00000458289 1591 ntBASIC2.31□□□□□ -2.04
NEK1Q96PY6 AP000560.1-201ENST00000624150 1937 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 AC092268.1-201ENST00000342691 405 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 Y_RNA.269-201ENST00000364685 89 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 Y_RNA.301-201ENST00000364990 103 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 RNU6-306P-201ENST00000384617 107 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 MIR517A-201ENST00000385001 87 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 MIR29B2-201ENST00000385055 81 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NEK1Q96PY6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NEK1Q96PY6 U8.13-201ENST00000390842 128 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NEK1Q96PY6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 MTND3P8-201ENST00000412909 339 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.3□□□□□ -2.04
NEK1Q96PY6 RBMX2P4-201ENST00000441256 376 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.3□□□□□ -2.04
NEK1Q96PY6 AL353572.1-201ENST00000442490 417 ntBASIC2.3□□□□□ -2.04
NEK1Q96PY6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.3□□□□□ -2.04
NEK1Q96PY6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.3□□□□□ -2.04
NEK1Q96PY6 RNA5SP233-201ENST00000459153 113 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms