Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU2-10P-201ENST00000516375 211 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AC027419.1-201ENST00000522976 328 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 MIR4778-201ENST00000577635 80 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 MIR3118-1-201ENST00000581787 76 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AL139022.2-201ENST00000606934 443 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AP002360.4-201ENST00000606980 481 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AC104458.1-201ENST00000608243 463 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AL512506.1-201ENST00000613918 449 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 Z69720.2-201ENST00000624755 279 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 MTND4P5-201ENST00000435821 1374 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 CASC19-280ENST00000642102 1351 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AL589826.1-201ENST00000340697 249 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 RNU4-48P-201ENST00000365559 182 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 RNU6-1026P-201ENST00000384465 108 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 SNORD89-201ENST00000390981 114 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 SNORA26.3-201ENST00000391119 136 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 MIR548J-201ENST00000408833 112 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC007283.2-201ENST00000424739 197 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 MTND1P32-201ENST00000433043 938 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC022493.2-201ENST00000506122 481 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC091874.1-201ENST00000511402 339 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC025465.4-201ENST00000513422 638 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 ADI1P3-201ENST00000549509 470 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC012467.1-201ENST00000607740 256 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC072039.2-201ENST00000608883 439 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AP000484.1-201ENST00000620067 1252 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 MIR8054-201ENST00000620877 86 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 MIR6513-201ENST00000621188 64 ntBASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.12□□□□□ -2.39
AP1S3Q96PC3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.12□□□□□ -2.39
AP1S3Q96PC3 AC092268.1-201ENST00000342691 405 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AC090625.1-201ENST00000357130 210 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 RNU6-428P-201ENST00000362942 107 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 RNU4-76P-201ENST00000364509 141 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 SNORA72.2-201ENST00000365028 127 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 RPS20P2-201ENST00000402520 389 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 MIR1276-201ENST00000408707 83 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AC005002.2-201ENST00000438228 269 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 LRRC6P1-201ENST00000532188 885 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AC090517.1-201ENST00000569307 266 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AC009994.1-201ENST00000606889 253 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.11□□□□□ -2.39
AP1S3Q96PC3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 AL359740.1-201ENST00000624340 592 ntBASIC0.11□□□□□ -2.39
AP1S3Q96PC3 RNU6-336P-201ENST00000364891 107 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
AP1S3Q96PC3 AC002486.1-201ENST00000435098 391 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.1□□□□□ -2.39
AP1S3Q96PC3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.1□□□□□ -2.39
AP1S3Q96PC3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.1□□□□□ -2.39
AP1S3Q96PC3 AP002001.1-203ENST00000534002 267 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 MTND4LP25-201ENST00000570218 163 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 TMF1P1-201ENST00000576058 373 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 AC008521.1-201ENST00000587471 187 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 7SK.10-201ENST00000621414 298 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 AL359757.2-201ENST00000624309 274 ntBASIC0.1□□□□□ -2.39
AP1S3Q96PC3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
AP1S3Q96PC3 RNU6-37P-201ENST00000362692 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-11P-201ENST00000364234 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-25P-201ENST00000383873 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-1-201ENST00000383898 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-48P-201ENST00000384161 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-36P-201ENST00000384172 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-4P-201ENST00000384205 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-5P-201ENST00000384238 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-3P-201ENST00000384314 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 SNORA24.1-201ENST00000384401 135 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-15P-201ENST00000384534 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-2-201ENST00000384627 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-29P-201ENST00000384637 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-9-201ENST00000384776 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-33P-201ENST00000384793 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 MIR216A-201ENST00000385063 110 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 MIR660-201ENST00000385235 97 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-440P-201ENST00000390882 105 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
AP1S3Q96PC3 MIR1283-1-201ENST00000408494 87 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-607P-201ENST00000411283 108 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 AC078809.1-201ENST00000427601 140 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 AL603825.1-201ENST00000438481 80 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 U7.7-201ENST00000459276 60 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNA5SP216-201ENST00000516111 123 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 AC090049.2-201ENST00000550377 109 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms