Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.73□□□□□ -1.97
CCDC138Q96M89 AC084781.2-201ENST00000615568 161 ntBASIC2.73□□□□□ -1.97
CCDC138Q96M89 AC092608.2-201ENST00000624427 218 ntBASIC2.73□□□□□ -1.97
CCDC138Q96M89 MIR1248-201ENST00000629190 106 ntBASIC2.73□□□□□ -1.97
CCDC138Q96M89 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CCDC138Q96M89 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC138Q96M89 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC138Q96M89 RNU4-79P-201ENST00000362764 141 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 Y_RNA.58-201ENST00000362807 102 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 Y_RNA.154-201ENST00000363624 102 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 RNY3P1-201ENST00000365085 102 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 RNY3-201ENST00000365484 102 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 MTCYBP10-201ENST00000424905 650 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 MTCO3P29-201ENST00000432119 779 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC138Q96M89 AL035666.1-201ENST00000446195 348 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC138Q96M89 RN7SL429P-201ENST00000479090 223 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 AC107032.1-201ENST00000485945 480 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 RN7SL489P-201ENST00000486185 223 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 RN7SL327P-201ENST00000488659 223 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC138Q96M89 SNORA4.4-201ENST00000515921 135 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 RN7SKP132-201ENST00000516001 208 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 Y_RNA.706-201ENST00000516933 99 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC138Q96M89 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 C8orf59P2-201ENST00000603441 271 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 AC016727.2-201ENST00000603988 621 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 SNRPGP20-201ENST00000604477 205 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 RN7SL853P-201ENST00000617250 223 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 AC126177.8-201ENST00000618339 1015 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 AL359697.1-201ENST00000624879 587 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 FO624990.1-201ENST00000636373 85 ntBASIC2.72□□□□□ -1.97
CCDC138Q96M89 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC138Q96M89 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC138Q96M89 BX322639.1-202ENST00000423987 2213 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC138Q96M89 Y_RNA.319-201ENST00000365138 92 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 RNU6-234P-201ENST00000365229 104 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 RNU6-890P-201ENST00000384121 107 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 RNU1-52P-201ENST00000384190 164 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 RNU6-541P-201ENST00000384709 110 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 MIR592-201ENST00000384959 97 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC007064.1-201ENST00000412238 351 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC027124.2-201ENST00000428249 105 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 ANXA2P1-201ENST00000505539 926 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC138Q96M89 AL049779.4-201ENST00000604500 156 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC005562.2-201ENST00000618264 111 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC104985.2-201ENST00000620598 500 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
CCDC138Q96M89 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC138Q96M89 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CCDC138Q96M89 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC138Q96M89 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC138Q96M89 SNORA80A-201ENST00000363922 136 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 RNU6-743P-201ENST00000364151 106 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 SNORA18.2-201ENST00000383865 132 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 RNU6-301P-201ENST00000384277 107 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 MIR487A-201ENST00000385009 80 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC138Q96M89 TOMM22P6-201ENST00000465035 409 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 RPS23P5-201ENST00000495419 428 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC138Q96M89 RNU5F-4P-201ENST00000516581 114 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 RNU6-58P-201ENST00000517143 103 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC138Q96M89 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC138Q96M89 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC138Q96M89 SNRPGP17-201ENST00000603780 214 ntBASIC2.7□□□□□ -1.98
CCDC138Q96M89 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC138Q96M89 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC138Q96M89 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC138Q96M89 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC138Q96M89 RNU1-76P-201ENST00000362903 159 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 MIR190B-201ENST00000401119 79 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 AL357139.1-201ENST00000407792 426 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 AC007098.1-201ENST00000420122 367 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 AC022493.2-201ENST00000506122 481 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC138Q96M89 RNU6-470P-201ENST00000515954 104 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 RNU6-1098P-201ENST00000516772 96 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 RNU2-44P-201ENST00000516795 194 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 AC027288.2-201ENST00000553028 243 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 AC026271.5-201ENST00000577873 130 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC138Q96M89 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC138Q96M89 AL355802.3-201ENST00000607571 545 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 TCL6_2.1-201ENST00000615162 119 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms