Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC136Q96JN2 RNA5SP68-201ENST00000363885 119 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 RN7SKP32-201ENST00000410167 303 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AL358453.1-201ENST00000422522 250 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC136Q96JN2 HMGB1P18-201ENST00000438801 619 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 MTND4P17-201ENST00000470444 350 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 RPL23AP75-201ENST00000491601 451 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AC093259.1-201ENST00000509755 300 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 ATP5EP1-201ENST00000510257 156 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 SNORA20.3-201ENST00000516880 132 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AC026271.5-201ENST00000577873 130 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 MIR4672-201ENST00000583126 81 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AL096840.1-201ENST00000603287 93 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 MIR6817-201ENST00000615588 66 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 MIR6766-201ENST00000622641 72 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC136Q96JN2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.9□□□□□ -1.94
CCDC136Q96JN2 MTND5P9-201ENST00000503854 1755 ntBASIC2.9□□□□□ -1.94
CCDC136Q96JN2 RNU6-842P-201ENST00000384269 107 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AC138393.2-201ENST00000414742 246 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AC116353.2-201ENST00000505332 712 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 RNA5SP148-201ENST00000516527 94 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 RNA5SP137-201ENST00000516833 135 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 SNORA31.25-201ENST00000517242 134 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC136Q96JN2 DEFB131C-201ENST00000528817 165 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AC021269.2-201ENST00000532318 330 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC136Q96JN2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AC010928.2-201ENST00000588017 287 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AL158827.2-201ENST00000602494 330 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AC025754.2-201ENST00000606491 432 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC136Q96JN2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC136Q96JN2 AL691447.3-201ENST00000635020 330 ntBASIC2.9□□□□□ -1.95
CCDC136Q96JN2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CCDC136Q96JN2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC136Q96JN2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 SNORD81.2-201ENST00000365153 76 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 Y_RNA.339-201ENST00000365325 102 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 SNORA18.2-201ENST00000383865 132 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 Y_RNA.533-201ENST00000384596 114 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC074085.1-201ENST00000413598 418 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC107399.1-201ENST00000451226 265 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 RNA5SP490-201ENST00000517141 136 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC016727.2-201ENST00000603988 621 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 RBM11P1-201ENST00000604951 799 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC103810.6-201ENST00000606708 136 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 AC022306.2-201ENST00000617563 647 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.89□□□□□ -1.95
CCDC136Q96JN2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC136Q96JN2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 Y_RNA.48-201ENST00000362710 103 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 SNORA16B-201ENST00000364674 135 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 HMGN2P39-201ENST00000398005 273 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 EIF4EP2-201ENST00000422816 654 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 AC027124.2-201ENST00000428249 105 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 SNORA59A-201ENST00000459326 152 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 HMGN1P12-201ENST00000499125 195 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 RNU6-1016P-201ENST00000516689 94 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 RNU2-19P-201ENST00000517288 84 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 MIR4801-201ENST00000582704 82 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 MIR4273-201ENST00000582824 84 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 AC046143.2-201ENST00000609789 160 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 uc_338.5-201ENST00000611839 155 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 SCARNA4-201ENST00000629045 128 ntBASIC2.88□□□□□ -1.95
CCDC136Q96JN2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CCDC136Q96JN2 Y_RNA.88-201ENST00000363029 99 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 Y_RNA.166-201ENST00000363730 102 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 RNU6-174P-201ENST00000410406 106 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC136Q96JN2 AC018634.1-201ENST00000437554 401 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 AC098614.3-201ENST00000438957 440 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 HMGN2P18-201ENST00000450680 270 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 OR2AQ1P-201ENST00000451972 200 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 SNORD5.1-201ENST00000458800 75 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 UBE2DNL-203ENST00000474922 222 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 AC026782.1-201ENST00000512952 449 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 MIR4529-201ENST00000578110 78 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 AC018462.2-201ENST00000605375 395 ntBASIC2.87□□□□□ -1.95
CCDC136Q96JN2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms