Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-1329P-201ENST00000365664 107 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 RNU6-877P-201ENST00000383868 107 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 SNORD116-9-201ENST00000384000 95 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 SNORA29-201ENST00000384183 140 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 SNORD116-3-201ENST00000384287 95 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 Y_RNA.481-201ENST00000384373 102 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 SNORD116-7-201ENST00000384404 95 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 SNORD116-5-201ENST00000384462 95 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 RNU6-997P-201ENST00000384725 107 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 MIR520A-201ENST00000384862 85 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 DEFB108C-201ENST00000400154 252 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 MIR300-201ENST00000401138 83 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.8□□□□□ -2.12
VMP1Q96GC9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.8□□□□□ -2.12
VMP1Q96GC9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 RPL7P54-201ENST00000438336 674 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 AC083798.1-201ENST00000472671 131 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 RPL36AP21-201ENST00000490372 323 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 AC091885.1-201ENST00000506658 268 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 RNA5SP182-201ENST00000516064 82 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 AC104576.1-201ENST00000524225 88 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.8□□□□□ -2.12
VMP1Q96GC9 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
VMP1Q96GC9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VMP1Q96GC9 RNU6-545P-201ENST00000362681 104 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 RNU6-862P-201ENST00000362804 105 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 Y_RNA.378-201ENST00000365652 113 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VMP1Q96GC9 SNORA69-201ENST00000383895 132 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 MIR504-201ENST00000385065 83 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 MIR1267-201ENST00000408723 78 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 RNU2-7P-201ENST00000410794 178 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 AL663109.1-201ENST00000411498 844 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 ARL5AP1-201ENST00000418991 388 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 AC099677.2-201ENST00000436385 175 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 AL357134.1-201ENST00000445848 426 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.79□□□□□ -2.12
VMP1Q96GC9 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.79□□□□□ -2.12
VMP1Q96GC9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
VMP1Q96GC9 AL118558.2-201ENST00000556294 238 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.79□□□□□ -2.12
VMP1Q96GC9 AC104984.5-201ENST00000586878 94 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 AL121757.2-201ENST00000611223 313 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
VMP1Q96GC9 AC068205.3-201ENST00000636385 468 ntBASIC1.79□□□□□ -2.12
VMP1Q96GC9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
VMP1Q96GC9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VMP1Q96GC9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VMP1Q96GC9 AC010615.1-201ENST00000594254 1764 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 Y_RNA.67-201ENST00000362870 100 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 RNU6-1317P-201ENST00000364582 104 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 MIR583-201ENST00000384846 75 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 MIR1289-2-201ENST00000408360 111 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 RNA5SP494-201ENST00000410653 129 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 Y_RNA.654-201ENST00000497848 106 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 SNORA19.2-201ENST00000516013 114 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 SCOCP1-201ENST00000554676 349 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 MIR5692C1-201ENST00000585309 91 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 MIR6715A-201ENST00000615929 79 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 AL359697.1-201ENST00000624879 587 ntBASIC1.78□□□□□ -2.12
VMP1Q96GC9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.78□□□□□ -2.12
VMP1Q96GC9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
VMP1Q96GC9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VMP1Q96GC9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VMP1Q96GC9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VMP1Q96GC9 Y_RNA.409-201ENST00000383990 98 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 RNU6-214P-201ENST00000384130 107 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 SNORD116-1-201ENST00000384335 95 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 RNU6-1119P-201ENST00000384349 108 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 RNU6-360P-201ENST00000390944 104 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 RNU1-78P-201ENST00000391248 165 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 RNU2-20P-201ENST00000410425 191 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 FTH1P12-201ENST00000432137 551 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 HSPE1P9-201ENST00000440046 311 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 AL359672.1-201ENST00000442302 409 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.77□□□□□ -2.13
VMP1Q96GC9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.77□□□□□ -2.13
VMP1Q96GC9 TPT1P7-201ENST00000458300 517 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.77□□□□□ -2.13
VMP1Q96GC9 AC067942.3-201ENST00000512025 362 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VMP1Q96GC9 AL157687.1-201ENST00000554853 619 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 AC026470.2-201ENST00000561492 181 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 MIR4422-201ENST00000581938 83 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 MIR3611-201ENST00000584484 83 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms