Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 Z69720.2-201ENST00000624755 279 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 RNU6-545P-201ENST00000362681 104 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 Y_RNA.338-201ENST00000365320 114 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 RNY1P8-201ENST00000383970 114 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 RNA5SP323-201ENST00000391094 133 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 AL451046.2-201ENST00000403074 277 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 AL355796.1-201ENST00000406706 323 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 AL034345.1-201ENST00000407768 123 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 EEF1A1P40-201ENST00000412883 573 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 RPL22P18-201ENST00000417197 377 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.16□□□□□ -2.38
AP3S1Q92572 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.16□□□□□ -2.38
AP3S1Q92572 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.16□□□□□ -2.38
AP3S1Q92572 MIR5000-201ENST00000577717 103 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 AC078795.3-201ENST00000602913 472 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 AC017083.3-201ENST00000609955 700 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 AC243829.3-201ENST00000622177 108 ntBASIC0.16□□□□□ -2.38
AP3S1Q92572 MIRLET7D-201ENST00000362263 87 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 U3.4-201ENST00000363352 213 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 RNY4P16-201ENST00000364768 94 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 RNU6-413P-201ENST00000384115 107 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 RNU6-692P-201ENST00000384496 107 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 MIR660-201ENST00000385235 97 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 MIR1283-1-201ENST00000408494 87 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 ISCA1P6-201ENST00000427740 390 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.15□□□□□ -2.39
AP3S1Q92572 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.15□□□□□ -2.39
AP3S1Q92572 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.15□□□□□ -2.39
AP3S1Q92572 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.15□□□□□ -2.39
AP3S1Q92572 HMGB1P29-201ENST00000505659 499 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.15□□□□□ -2.39
AP3S1Q92572 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.15□□□□□ -2.39
AP3S1Q92572 RNU6-377P-201ENST00000515965 102 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 RNU6-496P-201ENST00000516145 99 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 RNU6-567P-201ENST00000516746 107 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 AC123904.2-201ENST00000548059 300 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.15□□□□□ -2.39
AP3S1Q92572 MIR4753-201ENST00000585119 83 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.15□□□□□ -2.39
AP3S1Q92572 AL512427.1-201ENST00000618593 349 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 MIR6788-201ENST00000618842 66 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 AC068787.1-201ENST00000623908 691 ntBASIC0.15□□□□□ -2.39
AP3S1Q92572 SNORD89-201ENST00000390981 114 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
AP3S1Q92572 TIMM9P3-201ENST00000428659 274 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.14□□□□□ -2.39
AP3S1Q92572 HSFY7P-201ENST00000432672 318 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 AC000111.3-201ENST00000433478 193 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 HSFY8P-201ENST00000437934 318 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 RNU6-948P-201ENST00000516374 107 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.14□□□□□ -2.39
AP3S1Q92572 PRELID3BP2-201ENST00000605362 201 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 AC009994.1-201ENST00000606889 253 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.14□□□□□ -2.39
AP3S1Q92572 MIR6513-201ENST00000621188 64 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 AL356596.1-201ENST00000624230 379 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 AC100810.6-201ENST00000638068 285 ntBASIC0.14□□□□□ -2.39
AP3S1Q92572 RNU6-199P-201ENST00000362954 107 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.13□□□□□ -2.39
AP3S1Q92572 RNU6-298P-201ENST00000390888 96 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 MIR1276-201ENST00000408707 83 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 RPS29P1-201ENST00000465274 159 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 RNU6-237P-201ENST00000515985 71 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 AC016256.1-201ENST00000547971 354 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 SUB1P2-201ENST00000556401 297 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 AL031775.1-201ENST00000607014 887 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 AC097065.2-201ENST00000608159 533 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 MIR6504-201ENST00000613520 61 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 AC005520.5-201ENST00000613926 164 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 AC073349.3-201ENST00000617616 186 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 7SK.10-201ENST00000621414 298 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 AL359697.1-201ENST00000624879 587 ntBASIC0.13□□□□□ -2.39
AP3S1Q92572 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
AP3S1Q92572 RNU6-552P-201ENST00000362869 119 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 Y_RNA.191-201ENST00000363972 113 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 SNORD114-22-201ENST00000365423 72 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
AP3S1Q92572 SNORA36.2-201ENST00000384004 127 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 RNU6-417P-201ENST00000384712 107 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 MIR216A-201ENST00000385063 110 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AC007283.2-201ENST00000424739 197 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AL353777.1-201ENST00000425552 326 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AL356583.2-201ENST00000426536 280 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AL133396.1-201ENST00000432048 687 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.12□□□□□ -2.39
AP3S1Q92572 MTND1P12-201ENST00000455231 147 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AC016632.1-201ENST00000503994 196 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AC106038.2-201ENST00000520706 568 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.12□□□□□ -2.39
AP3S1Q92572 MIR151B-201ENST00000584249 96 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 AC097478.2-201ENST00000610572 514 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 MIR8054-201ENST00000620877 86 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 MTND5P16-201ENST00000460269 1703 ntBASIC0.12□□□□□ -2.39
AP3S1Q92572 RNU6-562P-201ENST00000362731 107 ntBASIC0.11□□□□□ -2.39
AP3S1Q92572 SNORD32A-201ENST00000364805 84 ntBASIC0.11□□□□□ -2.39
AP3S1Q92572 RNU4-48P-201ENST00000365559 182 ntBASIC0.11□□□□□ -2.39
AP3S1Q92572 RNU6-16P-201ENST00000384385 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms