Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR1321-201ENST00000637766 79 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC024614.3-201ENST00000637860 256 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC010329.5-201ENST00000623497 2174 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.3-201ENST00000362331 103 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 RNU1-62P-201ENST00000362599 164 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 SNORA38-201ENST00000363946 132 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.256-201ENST00000364594 104 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 RNU1-133P-201ENST00000364867 167 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 MIR544A-201ENST00000384855 91 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 BTF3L4P2-201ENST00000392798 346 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 SNAP23P1-201ENST00000433229 246 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 CALM1P1-201ENST00000442082 433 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 FO393415.2-201ENST00000480085 343 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC107401.1-201ENST00000503426 685 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 CCDC34P1-201ENST00000507441 517 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 MRPS17P9-201ENST00000511924 393 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 RNU2-69P-201ENST00000516061 100 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 RNU6-965P-201ENST00000516721 96 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 SNORA31.16-201ENST00000516773 139 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 LINC00933-203ENST00000559812 219 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 MIR4424-201ENST00000585257 86 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 BNIP3P16-201ENST00000589779 534 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC016727.2-201ENST00000603988 621 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC069294.1-201ENST00000608397 350 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 U4.7-201ENST00000638126 106 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC138393.1-203ENST00000327086 343 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.393-201ENST00000383936 102 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 MTCO3P40-201ENST00000392516 676 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 RNU6-373P-201ENST00000411247 98 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AL031274.1-201ENST00000450334 232 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC006512.1-201ENST00000468816 291 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 MED28P2-201ENST00000475771 317 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 RPL22P13-201ENST00000493291 347 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AF213884.2-201ENST00000510417 903 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 CENPUP1-201ENST00000526649 1202 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 BNIP3P6-201ENST00000549284 499 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 MIR3672-201ENST00000584290 82 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 MIR5692C1-201ENST00000585309 91 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC010525.2-201ENST00000590920 195 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 RNU6-85P-201ENST00000605989 107 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC084782.3-201ENST00000612282 578 ntBASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SHROOM3Q8TF72 RNU6-944P-201ENST00000364023 107 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU6-522P-201ENST00000364497 107 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AL591034.2-201ENST00000402839 359 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AL513475.1-201ENST00000406602 315 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AL356379.1-201ENST00000414105 126 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 EDDM3CP-201ENST00000415977 425 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC013470.1-201ENST00000453438 462 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU7-180P-201ENST00000459240 63 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RPL31P41-201ENST00000477967 372 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC018437.1-201ENST00000492214 406 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNA5SP476-201ENST00000516613 103 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 COPS8P3-201ENST00000526024 482 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 ZNF519P2-201ENST00000557032 169 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 MIR4287-201ENST00000579398 78 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 HMGB1P24-202ENST00000615653 685 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC090617.10-201ENST00000624308 134 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 FER-210ENST00000628534 558 ntTSL 5 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC068137.4-201ENST00000638485 296 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.2-201ENST00000362330 96 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU4-56P-201ENST00000364700 142 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU6-1222P-201ENST00000384615 107 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU6-541P-201ENST00000384709 110 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC008267.5-201ENST00000424928 265 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 MTND3P9-201ENST00000429526 346 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AL591043.1-201ENST00000432461 424 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AL353752.1-201ENST00000454946 260 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 PMCHL2-203ENST00000457791 237 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU7-187P-201ENST00000458985 68 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 SRRM1P2-201ENST00000464531 1192 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms