Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC006380.1-201ENST00000603598 186 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AL356157.2-201ENST00000605122 111 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.28□□□□□ -1.73
NEDD1Q8NHV4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 MAPK10-373ENST00000641983 6772 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 RNU6-508P-201ENST00000363231 103 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 SNORD115-30-201ENST00000364117 82 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 Y_RNA.328-201ENST00000365208 113 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 SNORA51.10-201ENST00000384418 136 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 MIR518D-201ENST00000385014 87 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 RNU7-141P-201ENST00000459304 62 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 HSPE1P4-201ENST00000550617 308 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD1Q8NHV4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 Y_RNA.120-201ENST00000363304 110 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 RNU6-727P-201ENST00000363592 107 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 Y_RNA.368-201ENST00000365547 113 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 AL031003.1-201ENST00000404229 172 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 RPS26P42-201ENST00000413485 326 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 RPS29P4-201ENST00000414733 161 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 AL590399.6-201ENST00000446396 307 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 AC110768.1-201ENST00000509222 400 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 RN7SKP234-201ENST00000517173 224 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 AC091178.2-201ENST00000584401 117 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 AL031274.2-201ENST00000599419 203 ntBASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD1Q8NHV4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 RNU6-766P-201ENST00000362478 107 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 RNU6-1205P-201ENST00000363625 106 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 Y_RNA.310-201ENST00000365063 113 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 RNU6-356P-201ENST00000384140 107 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 YME1L1P1-201ENST00000429435 297 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 AC007215.1-201ENST00000464893 276 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 SNRPGP7-201ENST00000469016 106 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 RN7SKP19-201ENST00000516016 252 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 AP004607.1-201ENST00000524456 203 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 AC018630.3-201ENST00000542637 96 ntBASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD1Q8NHV4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 Y_RNA.281-201ENST00000364774 94 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 RN7SKP177-201ENST00000410567 355 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 YPEL5P1-201ENST00000419731 367 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 RNU5F-2P-201ENST00000516066 82 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 SNORA70.18-201ENST00000516696 98 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AL121603.1-201ENST00000553815 142 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 RPL30P11-203ENST00000598995 310 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AC024220.1-201ENST00000603675 484 ntBASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD1Q8NHV4 AL359693.1-201ENST00000614959 2407 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 RNU5F-3P-201ENST00000363767 117 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 SNORD45.3-201ENST00000363836 72 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 MIR218-2-201ENST00000385006 110 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 HMGN2P8-201ENST00000391458 268 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 RN7SKP61-201ENST00000410642 295 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms