Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC087884.1-201ENST00000469738 328 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AC027575.1-201ENST00000481064 460 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AC105313.1-201ENST00000509121 353 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AC022880.1-201ENST00000534017 973 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 LRRC34P1-201ENST00000542742 915 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AC022254.1-201ENST00000567857 235 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AC110760.3-201ENST00000598794 467 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AL590095.2-201ENST00000604136 117 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AC006566.1-201ENST00000608943 513 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AC007742.2-201ENST00000618226 398 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 AL603839.4-201ENST00000624658 1005 ntBASIC1.35□□□□□ -2.19
COL22A1Q8NFW1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 RNU1-62P-201ENST00000362599 164 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 MT-TH-201ENST00000387441 69 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 SNORA48.1-201ENST00000390879 135 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 MTND2P18-201ENST00000419962 1030 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC078809.1-201ENST00000427601 140 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC009961.2-201ENST00000435771 251 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 SNORA18.6-201ENST00000516792 115 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC005786.1-201ENST00000588553 154 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 Z99497.2-201ENST00000603634 310 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC010900.2-201ENST00000604508 210 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AC016925.2-201ENST00000605108 242 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 SNORD114-21-201ENST00000606412 72 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 AL050343.2-201ENST00000607338 280 ntBASIC1.34□□□□□ -2.19
COL22A1Q8NFW1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 RNU6-414P-201ENST00000363705 104 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 RNU4-48P-201ENST00000365559 182 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 Y_RNA.433-201ENST00000384089 102 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 RNU6-74P-201ENST00000384235 107 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC123900.1-201ENST00000420390 96 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 CYCSP46-201ENST00000423569 204 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 SNRPEP8-201ENST00000442866 260 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 MTND3P7-201ENST00000474435 343 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC079382.1-201ENST00000493346 557 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 MTND1P22-201ENST00000510572 951 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 HMGB1P33-201ENST00000563485 527 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 BNIP3P16-201ENST00000589779 534 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AL356157.2-201ENST00000605122 111 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AL390237.1-201ENST00000404226 1415 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 U3.4-201ENST00000363352 213 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 RNA5SP100-201ENST00000410903 110 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 RNA5SP59-201ENST00000410922 110 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 PIGFP2-201ENST00000421400 651 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC092447.3-201ENST00000426027 686 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 SCARNA18-201ENST00000459004 134 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 RNA5SP269-201ENST00000459032 137 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 Y_RNA.717-201ENST00000517106 92 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC069113.1-201ENST00000517763 267 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 MIR5094-201ENST00000578766 85 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 AC008536.2-201ENST00000607284 349 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.33□□□□□ -2.2
COL22A1Q8NFW1 ZNF680P1-201ENST00000436625 1469 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 MIR424-201ENST00000362227 98 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 U3.9-201ENST00000363823 204 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 RNU6-1303P-201ENST00000364841 107 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 AF228730.1-201ENST00000397972 663 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 RPL21P111-201ENST00000418453 477 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 RNU1-98P-201ENST00000458992 160 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 RNU7-14P-201ENST00000459331 62 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 SNORD42A-201ENST00000459584 64 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 AC130509.1-201ENST00000464158 433 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.32□□□□□ -2.2
COL22A1Q8NFW1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms