Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNU6-326P-201ENST00000365480 107 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 Y_RNA.446-201ENST00000384178 104 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 RNU6-21P-201ENST00000384710 107 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 MIR548I3-201ENST00000408378 149 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 MIR548I1-201ENST00000408810 149 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC004866.1-201ENST00000411748 78 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AL035423.1-201ENST00000420331 213 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC009969.1-201ENST00000438726 172 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 IFNA11P-201ENST00000446352 526 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 UQCRBP2-201ENST00000447827 297 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 RN7SL75P-201ENST00000461926 281 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC145146.1-201ENST00000496370 254 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 RN7SKP18-201ENST00000516005 275 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 DEFB131C-201ENST00000528817 165 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 EIF4A1P12-201ENST00000551910 141 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC130289.1-201ENST00000577321 73 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC005176.2-201ENST00000596933 147 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 SNRPGP20-201ENST00000604477 205 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC002064.3-201ENST00000623448 346 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIPK4Q8NE63 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RNU1-62P-201ENST00000362599 164 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 Y_RNA.269-201ENST00000364685 89 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AL359837.1-201ENST00000381357 287 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 SNORA46.1-201ENST00000391069 153 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AL512633.1-201ENST00000399931 655 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AL033519.2-201ENST00000403958 392 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AL390729.2-201ENST00000416137 156 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 Z98742.2-201ENST00000431564 187 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RPL23AP3-201ENST00000453844 468 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RNU6-625P-201ENST00000459412 107 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RNU4-71P-201ENST00000516258 113 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RNU6-966P-201ENST00000516479 104 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RNU2-31P-201ENST00000516954 155 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 RNU1-45P-201ENST00000517191 141 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AL109918.3-201ENST00000603072 338 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AC110079.1-202ENST00000635213 138 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HIPK4Q8NE63 AC093831.2-201ENST00000624393 3427 ntBASIC3.18□□□□□ -1.9
HIPK4Q8NE63 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 MAPK10-266ENST00000641066 6555 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC135776.4-201ENST00000624300 1904 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 RNU6-727P-201ENST00000363592 107 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 U3.9-201ENST00000363823 204 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 RNU6-1027P-201ENST00000383998 107 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 SNORA18.3-201ENST00000384122 132 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 Y_RNA.569-201ENST00000384749 103 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 SNORA53-201ENST00000391141 249 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 RNA5SP354-201ENST00000391247 136 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 RN7SKP111-201ENST00000410349 271 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 RPL19P1-201ENST00000411635 428 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 RAB28P5-201ENST00000427490 651 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 CYCSP4-201ENST00000429682 331 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC023632.4-201ENST00000517783 191 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AP002001.1-203ENST00000534002 267 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC026470.2-201ENST00000561492 181 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC008749.1-201ENST00000597650 306 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC022441.3-201ENST00000605737 136 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 IGHVIII-44-202ENST00000636235 289 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AC091564.4-201ENST00000533934 2194 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AL359854.1-201ENST00000614203 1594 ntBASIC3.17□□□□□ -1.9
HIPK4Q8NE63 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms