Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC63Q8NA47 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC63Q8NA47 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC63Q8NA47 AC109446.1-201ENST00000566172 220 ntBASIC2.01□□□□□ -2.09
CCDC63Q8NA47 AC026271.5-201ENST00000577873 130 ntBASIC2.01□□□□□ -2.09
CCDC63Q8NA47 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.01□□□□□ -2.09
CCDC63Q8NA47 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC63Q8NA47 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC63Q8NA47 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC63Q8NA47 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC63Q8NA47 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC63Q8NA47 Y_RNA.72-201ENST00000362894 103 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 Y_RNA.279-201ENST00000364763 95 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 RNU6-1283P-201ENST00000365314 105 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 RNU6-510P-201ENST00000391239 108 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 FGF7P8-201ENST00000402994 292 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 RNU2-41P-201ENST00000410991 178 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 MTND3P8-201ENST00000412909 339 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2□□□□□ -2.09
CCDC63Q8NA47 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 FTH1P25-201ENST00000447665 469 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC63Q8NA47 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 AC093259.1-201ENST00000509755 300 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2□□□□□ -2.09
CCDC63Q8NA47 DEFB131C-201ENST00000528817 165 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 SNRPGP18-201ENST00000553000 214 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2□□□□□ -2.09
CCDC63Q8NA47 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 MIR4287-201ENST00000579398 78 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2□□□□□ -2.09
CCDC63Q8NA47 AC124303.1-201ENST00000605703 360 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AC019193.3-201ENST00000609144 554 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AC009318.2-201ENST00000610917 651 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AL359314.1-201ENST00000616913 261 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AC005858.4-201ENST00000623191 700 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AC243829.7-201ENST00000633081 225 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 MTND5P6-201ENST00000422338 1798 ntBASIC2□□□□□ -2.09
CCDC63Q8NA47 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CCDC63Q8NA47 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 RNU6-1159P-201ENST00000362933 107 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 RNU6-234P-201ENST00000365229 104 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 RNU6-26P-201ENST00000383985 107 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 MT-TL1-201ENST00000386347 75 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CCDC63Q8NA47 RPS26P42-201ENST00000413485 326 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 AL353572.1-201ENST00000442490 417 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 AL513124.1-201ENST00000450410 614 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC63Q8NA47 MTND5P5-201ENST00000503764 376 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 ATP5EP1-201ENST00000510257 156 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 RNU6-991P-201ENST00000516168 107 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 Y_RNA.682-201ENST00000516457 100 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 POLR3GP2-201ENST00000588366 668 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 AC011712.1-201ENST00000588959 234 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 AL109918.3-201ENST00000603072 338 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
CCDC63Q8NA47 Y_RNA.160-201ENST00000363677 92 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 MIR518A2-201ENST00000384966 87 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 RNA5SP494-201ENST00000410653 129 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 RNU4-53P-201ENST00000410828 140 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 SRIP3-201ENST00000413200 219 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AL358453.1-201ENST00000422522 250 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 PPP1R2P5-201ENST00000457256 603 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 RPL23AP75-201ENST00000491601 451 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 HMGB3P17-201ENST00000504195 649 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 RNU2-44P-201ENST00000516795 194 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 MIR3122-201ENST00000577243 73 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 MIR4790-201ENST00000577799 79 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AP000654.2-201ENST00000605633 586 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 AC233981.2-201ENST00000611524 1614 ntBASIC1.98□□□□□ -2.09
CCDC63Q8NA47 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC63Q8NA47 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 CBX3P1-201ENST00000325243 554 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 RNU6-1059P-201ENST00000363752 98 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 Y_RNA.390-201ENST00000383932 102 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 SNORD14D-201ENST00000384390 87 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 MIR487A-201ENST00000385009 80 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms