Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 RNU6-827P-201ENST00000365553 106 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 RNU6-877P-201ENST00000383868 107 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 SNORA22-201ENST00000383907 134 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 USP9YP28-201ENST00000435142 589 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC132479.1-201ENST00000449160 144 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 RPS29P15-201ENST00000458329 171 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 ARL2BPP4-201ENST00000506854 471 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC005178.1-201ENST00000508392 440 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 MTND2P32-201ENST00000521584 1038 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC103996.1-201ENST00000555468 102 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 CYP3A52P-201ENST00000563326 91 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 MIR3941-201ENST00000582572 103 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AP001836.1-201ENST00000604675 523 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 MIR98-201ENST00000606724 119 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AC068787.1-201ENST00000623908 691 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 AL133216.2-202ENST00000634512 349 ntBASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ZIC4Q8N9L1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 RNA5SP327-201ENST00000362494 101 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 SNORA72.2-201ENST00000365028 127 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 RNU6-331P-201ENST00000384724 107 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 SNORD70.1-201ENST00000391007 85 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 MIR300-201ENST00000401138 83 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 TOMM22P2-201ENST00000430735 237 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC022364.2-201ENST00000457963 554 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 GMFBP1-201ENST00000467831 427 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 RPS26P45-201ENST00000471748 340 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC067942.3-201ENST00000512025 362 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 RNU2-69P-201ENST00000516061 100 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 RNU2-34P-201ENST00000516534 121 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 SNORA25.17-201ENST00000517184 124 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 MIR4703-201ENST00000577728 79 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 MIR548AB-201ENST00000584917 84 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 MIR4781-201ENST00000585250 76 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AL353149.1-201ENST00000610667 244 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC008147.4-201ENST00000617570 1204 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC022960.3-201ENST00000619794 441 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AL359697.1-201ENST00000624879 587 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AC099654.5-201ENST00000636479 350 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 AL450472.1-202ENST00000637286 180 ntBASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
ZIC4Q8N9L1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 RNU4-48P-201ENST00000365559 182 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 SNORA70.7-201ENST00000384159 133 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AL117342.1-201ENST00000404861 406 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 MTND3P17-201ENST00000416968 344 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC011233.1-201ENST00000422812 283 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC012306.1-201ENST00000423267 114 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC009961.2-201ENST00000435771 251 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 PGBD4P5-201ENST00000445958 426 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AL133217.1-201ENST00000450980 425 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC011406.1-201ENST00000512440 370 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC106038.2-201ENST00000520706 568 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 MIR4709-201ENST00000577272 72 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 SNORA59B-202ENST00000578183 701 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AC002044.1-201ENST00000606707 158 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 AP001506.1-201ENST00000615444 211 ntBASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.87□□□□□ -2.27
ZIC4Q8N9L1 MIR96-201ENST00000362288 78 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 RNU6-266P-201ENST00000364225 107 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 MIR194-1-201ENST00000384892 85 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 MIR1-2-201ENST00000384961 85 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 RNU6-1106P-201ENST00000390845 107 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 RNU6-195P-201ENST00000411352 109 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 RPL31P35-201ENST00000431058 377 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AC073910.1-201ENST00000445047 438 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms