Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC087477.1-201ENST00000465747 340 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AF186996.7-201ENST00000492781 209 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AC091435.1-201ENST00000505442 584 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP148-201ENST00000516527 94 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 RNU6-1198P-201ENST00000516904 67 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP54-201ENST00000516951 92 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 DEFB131C-201ENST00000528817 165 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 SNRPGP18-201ENST00000553000 214 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AC016727.2-201ENST00000603988 621 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AL138726.1-201ENST00000614873 333 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 DUXAP9-208ENST00000622815 614 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AL160394.1-201ENST00000624765 724 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 AL159152.1-201ENST00000635019 2587 ntBASIC1.47□□□□□ -2.17
LINC01561Q8N1V8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 Y_RNA.38-201ENST00000362617 102 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 SNORD115-32-201ENST00000364079 82 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 Y_RNA.414-201ENST00000384011 101 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC092017.2-201ENST00000427600 362 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 DLGAP5P1-201ENST00000430307 464 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 MTCO3P18-201ENST00000440206 761 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC069257.2-201ENST00000441819 155 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC004386.2-201ENST00000441858 148 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 RNU6-498P-201ENST00000459468 107 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 RNU6-256P-201ENST00000516747 97 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 MTND1P35-201ENST00000526739 508 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 HSBP1P1-201ENST00000555205 166 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 MIR5006-201ENST00000583027 110 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 MIR5002-201ENST00000584713 97 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC023043.2-201ENST00000589678 1026 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AP000907.4-201ENST00000604143 237 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC012493.3-201ENST00000604494 112 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AF250324.2-201ENST00000608299 610 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 MIR7106-201ENST00000612419 65 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC083806.3-201ENST00000614016 455 ntBASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
LINC01561Q8N1V8 AC092881.1-201ENST00000638218 2733 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU6-112P-201ENST00000363599 104 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU6-137P-201ENST00000363680 108 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU4-9P-201ENST00000364951 139 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU6-245P-201ENST00000384020 107 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 SNORA67.3-201ENST00000384366 140 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU6-790P-201ENST00000384479 105 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU6-95P-201ENST00000384697 107 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 MIR586-201ENST00000385035 97 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC009161.1-201ENST00000417306 376 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 EBAG9P1-201ENST00000418955 543 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC016907.1-201ENST00000419483 435 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 FTH1P12-201ENST00000432137 551 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 UBE2V1P8-201ENST00000437166 265 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AL021397.1-201ENST00000451806 248 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC079354.2-201ENST00000453523 154 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU7-187P-201ENST00000458985 68 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RPL23AP75-201ENST00000491601 451 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 MTCO2P30-201ENST00000503662 364 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 HMGB3P17-201ENST00000504195 649 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC025465.3-201ENST00000510570 311 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU6-948P-201ENST00000516374 107 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 SCARNA16.3-201ENST00000516595 184 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RNU6-344P-201ENST00000516635 111 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 TPRKBP2-201ENST00000565969 475 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 MIR4319-201ENST00000577285 85 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC046143.2-201ENST00000609789 160 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 RMST_3.1-201ENST00000611651 109 ntBASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01561Q8N1V8 Y_RNA.157-201ENST00000363638 102 ntBASIC1.44□□□□□ -2.18
LINC01561Q8N1V8 RNU4-40P-201ENST00000364351 143 ntBASIC1.44□□□□□ -2.18
LINC01561Q8N1V8 RNU6-1019P-201ENST00000364424 107 ntBASIC1.44□□□□□ -2.18
LINC01561Q8N1V8 RNU6-975P-201ENST00000384296 105 ntBASIC1.44□□□□□ -2.18
LINC01561Q8N1V8 MIR221-201ENST00000385135 110 ntBASIC1.44□□□□□ -2.18
LINC01561Q8N1V8 RNU6-332P-201ENST00000391193 108 ntBASIC1.44□□□□□ -2.18
LINC01561Q8N1V8 AL358453.1-201ENST00000422522 250 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms