Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
DDX60Q8IY21 PCNPP3-201ENST00000393579 471 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 AL357139.1-201ENST00000407792 426 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 SNORD111-201ENST00000408139 94 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 AC027644.1-201ENST00000419595 298 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-1.14□□□□□ -2.59
DDX60Q8IY21 STAG3L5P-204ENST00000443759 179 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.14□□□□□ -2.59
DDX60Q8IY21 RNU6-703P-201ENST00000516946 107 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 AC107952.2-201ENST00000606048 486 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-1.14□□□□□ -2.59
DDX60Q8IY21 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-1.14□□□□□ -2.59
DDX60Q8IY21 ELOCP14-201ENST00000428070 331 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AC119618.1-201ENST00000434191 222 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 ELOCP7-201ENST00000439968 331 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AC080078.2-201ENST00000603766 501 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AC104695.3-201ENST00000604052 296 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 uc_338.16-201ENST00000621804 95 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 MIR4275-201ENST00000636486 87 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 MTCO1P20-201ENST00000425366 358 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AC002381.1-201ENST00000447049 280 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AC245047.8-201ENST00000456455 284 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-1.15□□□□□ -2.59
DDX60Q8IY21 AP002001.1-203ENST00000534002 267 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 MIR3136-201ENST00000583498 78 ntBASIC-1.15□□□□□ -2.59
DDX60Q8IY21 SNORA25.7-201ENST00000364375 127 ntBASIC-1.16□□□□□ -2.6
DDX60Q8IY21 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.16□□□□□ -2.6
DDX60Q8IY21 RNU6-925P-201ENST00000384629 104 ntBASIC-1.16□□□□□ -2.6
DDX60Q8IY21 SNORA12.1-201ENST00000390873 148 ntBASIC-1.16□□□□□ -2.6
DDX60Q8IY21 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.16□□□□□ -2.6
DDX60Q8IY21 RNU6-180P-201ENST00000516697 61 ntBASIC-1.16□□□□□ -2.6
DDX60Q8IY21 ACA59.2-201ENST00000517061 156 ntBASIC-1.16□□□□□ -2.6
DDX60Q8IY21 MIR4436A-201ENST00000585278 85 ntBASIC-1.16□□□□□ -2.6
DDX60Q8IY21 RNA5SP192-201ENST00000364404 120 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 RNU6-505P-201ENST00000384427 107 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 SNORD83B-201ENST00000386745 93 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 AC068533.2-201ENST00000411872 306 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 MTND1P30-201ENST00000441241 901 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-1.17□□□□□ -2.6
DDX60Q8IY21 AC093012.1-202ENST00000549403 582 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 MIR378F-201ENST00000578143 78 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 MIR4324-201ENST00000584846 72 ntBASIC-1.17□□□□□ -2.6
DDX60Q8IY21 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-1.17□□□□□ -2.6
DDX60Q8IY21 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1.17□□□□□ -2.6
DDX60Q8IY21 SNORD114-14-201ENST00000362723 75 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 RAP1BP3-201ENST00000407180 549 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 ARL5AP1-201ENST00000418991 388 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
DDX60Q8IY21 NAMPTP3-201ENST00000569273 224 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.18□□□□□ -2.6
DDX60Q8IY21 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.18□□□□□ -2.6
DDX60Q8IY21 SPINT5P-201ENST00000448174 155 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.18□□□□□ -2.6
DDX60Q8IY21 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.18□□□□□ -2.6
DDX60Q8IY21 AC023827.1-201ENST00000569247 97 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 AC013476.2-201ENST00000614456 459 ntBASIC-1.18□□□□□ -2.6
DDX60Q8IY21 USP9YP22-201ENST00000438971 294 ntBASIC-1.19□□□□□ -2.6
DDX60Q8IY21 AC012308.1-201ENST00000451232 178 ntBASIC-1.19□□□□□ -2.6
DDX60Q8IY21 MRPL42P4-201ENST00000453267 443 ntBASIC-1.19□□□□□ -2.6
DDX60Q8IY21 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
DDX60Q8IY21 AC004832.4-201ENST00000608952 331 ntBASIC-1.19□□□□□ -2.6
DDX60Q8IY21 AL159972.1-201ENST00000625150 448 ntBASIC-1.19□□□□□ -2.6
DDX60Q8IY21 MTND5P33-201ENST00000571250 1450 ntBASIC-1.19□□□□□ -2.6
DDX60Q8IY21 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 Y_RNA.245-201ENST00000364493 95 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 MIR29B2-201ENST00000385055 81 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 RNA5SP323-201ENST00000391094 133 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 MTCO1P21-201ENST00000416634 589 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-1.2□□□□□ -2.6
DDX60Q8IY21 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AC109327.2-201ENST00000448339 378 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 CECR9-201ENST00000453421 199 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.2□□□□□ -2.6
DDX60Q8IY21 SNORD60.2-201ENST00000516883 86 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AC090049.2-201ENST00000550377 109 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AC018462.2-201ENST00000605375 395 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 U4.2-201ENST00000618561 85 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AC107297.1-201ENST00000459991 176 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 MIR4432-201ENST00000581823 84 ntBASIC-1.2□□□□□ -2.6
DDX60Q8IY21 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.2□□□□□ -2.6
DDX60Q8IY21 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.21□□□□□ -2.6
DDX60Q8IY21 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.21□□□□□ -2.6
DDX60Q8IY21 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.21□□□□□ -2.6
DDX60Q8IY21 SNORA8.2-201ENST00000384372 139 ntBASIC-1.21□□□□□ -2.6
DDX60Q8IY21 MTATP6P27-201ENST00000416987 621 ntBASIC-1.21□□□□□ -2.6
DDX60Q8IY21 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-1.21□□□□□ -2.6
DDX60Q8IY21 AC009646.1-201ENST00000510455 318 ntBASIC-1.21□□□□□ -2.6
DDX60Q8IY21 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms