Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 Z82217.1-201ENST00000625157 8149 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 RNU6-1048P-201ENST00000364054 107 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 RNU6-407P-201ENST00000365280 104 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 Y_RNA.368-201ENST00000365547 113 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 AL355497.1-201ENST00000406262 551 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 RNU6-855P-201ENST00000410395 104 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 SNORA57.3-201ENST00000411095 141 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 AL365496.1-201ENST00000426885 215 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 RPS26P28-201ENST00000470806 348 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 RNU1-95P-201ENST00000516357 160 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 RNU6-1007P-201ENST00000516586 107 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 RNU1-128P-201ENST00000516704 160 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 AL391813.1-201ENST00000603098 260 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 AL138880.2-201ENST00000616214 239 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
RNF135Q8IUD6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF135Q8IUD6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 RNA5SP72-201ENST00000364442 117 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 MIR218-2-201ENST00000385006 110 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 AL691449.1-201ENST00000426570 421 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 Z75741.1-201ENST00000446793 314 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 RNA5SP246-201ENST00000458909 119 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 PPBPP1-201ENST00000510807 373 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 SCARNA8-201ENST00000515924 131 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 RNU6-453P-201ENST00000516819 85 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF135Q8IUD6 AC026241.1-201ENST00000517873 2142 ntBASIC4.34□□□□□ -1.71
RNF135Q8IUD6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RNF135Q8IUD6 AC002546.1-201ENST00000588041 2504 ntBASIC4.34□□□□□ -1.72
RNF135Q8IUD6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.34□□□□□ -1.72
RNF135Q8IUD6 AC007256.1-201ENST00000392253 2765 ntBASIC4.34□□□□□ -1.72
RNF135Q8IUD6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF135Q8IUD6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.34□□□□□ -1.72
RNF135Q8IUD6 AC010680.1-201ENST00000590024 3590 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 AC069528.2-201ENST00000624849 1991 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 U3.8-201ENST00000363675 217 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 RNU6-1180P-201ENST00000364935 107 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 SNORA5A-201ENST00000384111 134 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 SNORA67.2-201ENST00000384300 149 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 RNU1-57P-201ENST00000384491 166 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 Y_RNA.572-201ENST00000384757 98 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 RNA5SP252-201ENST00000391131 119 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 RNA5SP154-201ENST00000516193 111 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 MIR5195-201ENST00000583555 115 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 AC015813.4-201ENST00000610469 179 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 MIR7154-201ENST00000620673 73 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 U6.115-201ENST00000636045 103 ntBASIC4.33□□□□□ -1.72
RNF135Q8IUD6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF135Q8IUD6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 Y_RNA.341-201ENST00000365341 102 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 Y_RNA.361-201ENST00000365515 120 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 RNU6-643P-201ENST00000384018 107 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 Y_RNA.456-201ENST00000384232 111 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 AP000567.1-201ENST00000406413 156 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 AL158823.1-201ENST00000418441 478 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 HMGN2P31-201ENST00000432430 273 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 RPL23AP46-201ENST00000438548 490 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 AC112771.1-201ENST00000463581 102 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 HSPE1P18-201ENST00000517602 280 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms