Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL117351.2-201ENST00000513571 157 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 MIR449C-201ENST00000516047 92 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 RNU6-1016P-201ENST00000516689 94 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.18□□□□□ -2.06
LDB1Q86U70 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.18□□□□□ -2.06
LDB1Q86U70 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.18□□□□□ -2.06
LDB1Q86U70 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.18□□□□□ -2.06
LDB1Q86U70 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
LDB1Q86U70 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.18□□□□□ -2.06
LDB1Q86U70 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.18□□□□□ -2.06
LDB1Q86U70 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AP001094.1-201ENST00000579805 193 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.18□□□□□ -2.06
LDB1Q86U70 RPL17P51-201ENST00000605218 238 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AC018462.2-201ENST00000605375 395 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AL590808.1-201ENST00000618696 141 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 SCARNA4-201ENST00000629045 128 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
LDB1Q86U70 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
LDB1Q86U70 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
LDB1Q86U70 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
LDB1Q86U70 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LDB1Q86U70 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LDB1Q86U70 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 RNU6-743P-201ENST00000364151 106 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 RNU4-9P-201ENST00000364951 139 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 SNORD81.2-201ENST00000365153 76 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 RNU6-234P-201ENST00000365229 104 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 Y_RNA.482-201ENST00000384377 111 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 AL358453.1-201ENST00000422522 250 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 PRELID3BP1-201ENST00000457142 540 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 FO393415.2-201ENST00000480085 343 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.17□□□□□ -2.06
LDB1Q86U70 AC008413.1-201ENST00000511864 177 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 Y_RNA.691-201ENST00000516611 103 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.17□□□□□ -2.06
LDB1Q86U70 AC090517.1-201ENST00000569307 266 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.17□□□□□ -2.06
LDB1Q86U70 MIR5696-201ENST00000578474 85 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 SNORD53-201ENST00000579969 78 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 AL031274.2-201ENST00000599419 203 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 AC022202.1-201ENST00000613515 211 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.17□□□□□ -2.06
LDB1Q86U70 TPTEP1-208ENST00000636884 213 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.17□□□□□ -2.06
LDB1Q86U70 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LDB1Q86U70 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LDB1Q86U70 RNU6-1059P-201ENST00000363752 98 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 RNA5SP126-201ENST00000365092 109 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 RNU6-601P-201ENST00000384540 107 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AL357139.1-201ENST00000407792 426 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 RNU2-41P-201ENST00000410991 178 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 SRIP3-201ENST00000413200 219 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.16□□□□□ -2.06
LDB1Q86U70 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.16□□□□□ -2.06
LDB1Q86U70 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.16□□□□□ -2.06
LDB1Q86U70 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.16□□□□□ -2.06
LDB1Q86U70 AC107032.1-201ENST00000485945 480 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.16□□□□□ -2.06
LDB1Q86U70 PRELID2P1-201ENST00000552837 301 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AC009127.3-201ENST00000570531 403 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AC005730.3-201ENST00000583067 366 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AL355073.2-201ENST00000612106 557 ntBASIC2.16□□□□□ -2.06
LDB1Q86U70 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.16□□□□□ -2.06
LDB1Q86U70 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.16□□□□□ -2.06
LDB1Q86U70 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.16□□□□□ -2.06
LDB1Q86U70 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LDB1Q86U70 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
LDB1Q86U70 AP006437.1-201ENST00000641440 3685 ntBASIC2.15□□□□□ -2.06
LDB1Q86U70 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.15□□□□□ -2.06
LDB1Q86U70 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LDB1Q86U70 Y_RNA.88-201ENST00000363029 99 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 SNORA72.1-201ENST00000363485 129 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 RNU6-842P-201ENST00000384269 107 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 SNORA11.2-201ENST00000408318 127 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 AC245102.2-201ENST00000448956 180 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.15□□□□□ -2.07
LDB1Q86U70 AC026782.1-201ENST00000512952 449 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 AC011494.1-201ENST00000596454 237 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 7SK.7-201ENST00000603504 247 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 AC064859.1-201ENST00000624741 174 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.15□□□□□ -2.07
LDB1Q86U70 AC099654.5-201ENST00000636479 350 ntBASIC2.15□□□□□ -2.07
LDB1Q86U70 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LDB1Q86U70 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LDB1Q86U70 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LDB1Q86U70 MTND4P12-201ENST00000498999 1377 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 SNORA40.19-201ENST00000390846 128 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 RNU6-1050P-201ENST00000410388 107 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 AC243428.1-201ENST00000421099 264 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 AC007215.1-201ENST00000464893 276 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 AC093259.1-201ENST00000509755 300 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms