Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MIR610-201ENST00000385139 96 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 MIR660-201ENST00000385235 97 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RNA5SP323-201ENST00000391094 133 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL603865.2-201ENST00000401679 213 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC098483.2-201ENST00000603158 454 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL358072.1-201ENST00000604156 575 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC018889.1-201ENST00000605372 397 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC009032.1-201ENST00000617574 431 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL356094.1-201ENST00000624663 1212 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL390237.1-201ENST00000404226 1415 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RNU6-862P-201ENST00000362804 105 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 SNORA63D-201ENST00000364359 132 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RNA5SP205-201ENST00000364653 136 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 MTCO2P12-201ENST00000427426 682 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 MTCO3P18-201ENST00000440206 761 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 MRPL42P4-201ENST00000453267 443 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RPS3AP17-201ENST00000472594 777 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 MTCO3P7-201ENST00000510008 774 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC027338.1-201ENST00000514840 825 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 SNORA76.2-201ENST00000517095 137 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL157871.3-201ENST00000557231 293 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC109446.1-201ENST00000566172 220 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL355297.3-201ENST00000604082 446 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC107982.1-201ENST00000507171 1300 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 SNORD32B-201ENST00000364460 84 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AL590084.2-201ENST00000401481 382 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 DAP3P1-201ENST00000441522 278 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 MTCO2P18-201ENST00000457151 658 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AC093809.1-201ENST00000509155 340 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AC010587.2-201ENST00000511727 448 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AC021231.3-201ENST00000558497 370 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AC004584.2-201ENST00000570407 410 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AL356157.2-201ENST00000605122 111 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AL357080.1-201ENST00000617394 239 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AC112487.2-201ENST00000637950 304 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNU6-932P-201ENST00000391108 106 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNA5SP111-201ENST00000411386 101 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AC027644.1-201ENST00000419595 298 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 ART2BP-201ENST00000453501 499 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AP001189.2-201ENST00000527320 189 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 SCARNA4-202ENST00000625402 129 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNU6-674P-201ENST00000363831 107 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 MIR217-201ENST00000384817 110 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AL133475.1-201ENST00000404414 305 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AC104982.1-201ENST00000478775 574 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RPS26P48-201ENST00000491713 339 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 RNU6-948P-201ENST00000516374 107 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AL162424.1-201ENST00000602325 221 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 AL445264.1-201ENST00000621719 171 ntBASIC-0.09□□□□□ -2.42
CSMD3Q7Z407 MIR18A-201ENST00000362310 71 ntBASIC-0.1□□□□□ -2.42
CSMD3Q7Z407 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.1□□□□□ -2.42
CSMD3Q7Z407 RNA5SP390-201ENST00000410191 113 ntBASIC-0.1□□□□□ -2.42
CSMD3Q7Z407 RNU2-62P-201ENST00000410868 191 ntBASIC-0.1□□□□□ -2.42
CSMD3Q7Z407 AC091163.3-201ENST00000518269 1144 ntBASIC-0.1□□□□□ -2.42
CSMD3Q7Z407 AC010975.3-201ENST00000618727 978 ntBASIC-0.1□□□□□ -2.42
CSMD3Q7Z407 AC015726.2-201ENST00000620112 122 ntBASIC-0.1□□□□□ -2.42
CSMD3Q7Z407 MIR10A-201ENST00000385043 110 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 RNA5SP222-201ENST00000411039 105 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 RPS23P5-201ENST00000495419 428 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 SUMO2P5-201ENST00000506790 245 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 RNU6-947P-201ENST00000516264 106 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 AC007751.1-201ENST00000529260 376 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 AC109810.1-201ENST00000534066 224 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 AC104985.3-201ENST00000623479 597 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 SNORD56.4-201ENST00000363883 71 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 RNU2-42P-201ENST00000410697 113 ntBASIC-0.1□□□□□ -2.43
CSMD3Q7Z407 RNU6-575P-201ENST00000411326 105 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms