Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LYSMD3Q7Z3D4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 Z82217.1-201ENST00000625157 8149 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 U8.6-201ENST00000364939 135 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 SNORD18B-201ENST00000365659 72 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-1080P-201ENST00000383982 107 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 Y_RNA.432-201ENST00000384087 111 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-106P-201ENST00000384405 107 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 SNORD116-13-201ENST00000384408 92 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 RN7SKP101-201ENST00000411376 320 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 AL358232.1-201ENST00000448030 501 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 AC090515.1-201ENST00000465295 476 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 RN7SL604P-201ENST00000492589 296 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-1337P-201ENST00000516525 95 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 POLR3GP1-201ENST00000594073 261 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 MIR7151-201ENST00000617477 60 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 AC112200.1-201ENST00000625015 234 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 RNA5SP196-201ENST00000625967 102 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 MIR3199-2-201ENST00000636243 86 ntBASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
LYSMD3Q7Z3D4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 FAM35DP-201ENST00000323387 2712 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 SNORD114-7-201ENST00000362520 77 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 SNORD114-19-201ENST00000363072 75 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-309P-201ENST00000364573 106 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-1323P-201ENST00000384025 107 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-905P-201ENST00000384434 107 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 SNORA1.3-201ENST00000384676 136 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 RNA5SP496-201ENST00000391240 109 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 RPL23AP82-202ENST00000427528 469 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 RPL23AP7-203ENST00000449021 469 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 CENPBD1P1-201ENST00000464061 469 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 AC145146.1-201ENST00000496370 254 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 AC106785.1-201ENST00000565935 262 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 AC025166.1-201ENST00000612411 163 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 AC034229.5-201ENST00000624258 185 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 AC004944.1-201ENST00000517807 3059 ntBASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.13□□□□□ -1.75
LYSMD3Q7Z3D4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNU1-13P-201ENST00000384499 162 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 SNORA37-201ENST00000384504 129 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-19P-201ENST00000384718 107 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 SNORA12.1-201ENST00000390873 148 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNA5SP317-201ENST00000410176 116 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-628P-201ENST00000410675 107 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNU2-55P-201ENST00000411146 174 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNA5SP311-201ENST00000411290 116 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AL445584.1-201ENST00000431451 330 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RPL39P40-201ENST00000445481 146 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNU6-437P-201ENST00000459408 95 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AC107626.1-201ENST00000471084 183 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNA5SP315-201ENST00000516340 116 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 RNA5SP312-201ENST00000517068 116 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AL160236.1-201ENST00000556317 195 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AC020914.4-201ENST00000597690 277 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AC112484.5-201ENST00000624189 228 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AC068647.1-201ENST00000489539 2265 ntBASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
LYSMD3Q7Z3D4 AC007656.2-201ENST00000624902 4547 ntBASIC4.11□□□□□ -1.75
LYSMD3Q7Z3D4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.11□□□□□ -1.75
LYSMD3Q7Z3D4 RNU4-41P-201ENST00000364426 143 ntBASIC4.11□□□□□ -1.75
LYSMD3Q7Z3D4 SNORA48.7-201ENST00000391302 135 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms