Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIR548K-201ENST00000408406 116 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 MIR1294-201ENST00000408503 142 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 RNA5SP508-201ENST00000411327 119 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 AC138393.2-201ENST00000414742 246 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 EIF4EP2-201ENST00000422816 654 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 RPL23AP6-201ENST00000446637 472 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 AL513124.1-201ENST00000450410 614 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 RPL23AP3-201ENST00000453844 468 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 RNU7-30P-201ENST00000516835 62 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 PRELID2P1-201ENST00000552837 301 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 AL132822.1-201ENST00000617063 513 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 AC022306.2-201ENST00000617563 647 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 SNORD50.1-201ENST00000362987 71 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 RNU6-596P-201ENST00000365395 98 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 Y_RNA.390-201ENST00000383932 102 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 RNU6-306P-201ENST00000384617 107 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AL356432.1-201ENST00000405809 419 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC074085.1-201ENST00000413598 418 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 Z82205.1-201ENST00000428456 297 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC079354.2-201ENST00000453523 154 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC132942.1-201ENST00000486753 483 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC116353.2-201ENST00000505332 712 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC116337.1-201ENST00000509680 687 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 RNA5SP281-201ENST00000516504 135 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 MRPS36P4-201ENST00000534436 298 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC005668.1-201ENST00000571142 476 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 uc_338.5-201ENST00000611839 155 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AL590808.1-201ENST00000618696 141 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 AC233981.2-201ENST00000611524 1614 ntBASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP54Q7Z3B4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 RNU6-593P-201ENST00000364716 112 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 Y_RNA.339-201ENST00000365325 102 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 RNU6-378P-201ENST00000384324 107 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 SNORA12-201ENST00000391162 147 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 MIR208B-201ENST00000401172 77 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 RNA5SP494-201ENST00000410653 129 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 RPS26P42-201ENST00000413485 326 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC096920.1-201ENST00000423991 241 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 RPS15AP28-201ENST00000435088 386 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC098614.3-201ENST00000438957 440 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 FTH1P25-201ENST00000447665 469 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 SNORD5.1-201ENST00000458800 75 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 RPL23AP94-201ENST00000512518 302 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC008749.1-201ENST00000597650 306 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC009994.1-201ENST00000606889 253 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC009318.2-201ENST00000610917 651 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AL137847.3-201ENST00000611521 109 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 MIR6128-201ENST00000615528 109 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 AC005858.4-201ENST00000623191 700 ntBASIC2.11□□□□□ -2.07
NUP54Q7Z3B4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 XGY1-201ENST00000381172 446 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 SNORD14D-201ENST00000384390 87 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 MIR548F5-201ENST00000408421 86 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 PDCL2P1-201ENST00000419302 352 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 HMGB1P18-201ENST00000438801 619 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AL353705.4-201ENST00000449661 238 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 MTND3P10-201ENST00000450967 341 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AC107399.1-201ENST00000451226 265 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AF186996.7-201ENST00000492781 209 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AC107222.1-201ENST00000510899 637 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AC005741.1-201ENST00000511094 432 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 RNU6-965P-201ENST00000516721 96 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 HSPE1P18-201ENST00000517602 280 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AC109446.1-201ENST00000566172 220 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 MIR4299-201ENST00000577899 72 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AP001094.1-201ENST00000579805 193 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AP000654.2-201ENST00000605633 586 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 AC137590.2-201ENST00000619709 240 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 MIR6766-201ENST00000622641 72 ntBASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NUP54Q7Z3B4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AC009487.4-201ENST00000624969 3585 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 MTND5P9-201ENST00000503854 1755 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 RNU6-26P-201ENST00000383985 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms