Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RNU6-418P-201ENST00000384035 107 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 RNU6-483P-201ENST00000384088 108 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 RNU2-16P-201ENST00000410712 136 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.85□□□□□ -2.11
C11orf88Q6PI97 HMGB1P18-201ENST00000438801 619 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.85□□□□□ -2.11
C11orf88Q6PI97 AC007395.1-201ENST00000451333 677 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 RPS29P21-201ENST00000496272 170 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 RNA5SP281-201ENST00000516504 135 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 AC026371.1-201ENST00000551867 419 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 SCOCP1-201ENST00000554676 349 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 AC245505.1-201ENST00000556398 224 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 MIR5006-201ENST00000583027 110 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 AC010525.2-201ENST00000590920 195 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.85□□□□□ -2.11
C11orf88Q6PI97 RPL17P51-201ENST00000605218 238 ntBASIC1.85□□□□□ -2.11
C11orf88Q6PI97 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 MIR340-201ENST00000362125 95 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 RNU6-790P-201ENST00000384479 105 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 ERLEC1P1-201ENST00000433806 578 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AC010095.1-201ENST00000443543 144 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AC096638.1-201ENST00000444678 216 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 RNU6-314P-201ENST00000516574 104 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AL158827.2-201ENST00000602494 330 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AC016727.2-201ENST00000603988 621 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 RNU6-89P-201ENST00000606519 100 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 AL691447.3-201ENST00000635020 330 ntBASIC1.84□□□□□ -2.11
C11orf88Q6PI97 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 MIR126-201ENST00000362291 85 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 RNU6-862P-201ENST00000362804 105 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 RNU1-76P-201ENST00000362903 159 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AL445685.2-201ENST00000422551 342 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AC004386.2-201ENST00000441858 148 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 ATP5J2P3-201ENST00000451550 258 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AC016925.1-201ENST00000458303 298 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AC010531.2-201ENST00000465012 153 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 MTCO1P29-201ENST00000496868 288 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 HMGN1P13-201ENST00000505795 138 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 RNU6-1041P-201ENST00000516254 102 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 CBX3P4-201ENST00000538909 354 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 MIR4753-201ENST00000585119 83 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AL162413.1-201ENST00000603198 110 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AP000907.4-201ENST00000604143 237 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 MIR3976-201ENST00000606807 139 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AC005562.2-201ENST00000618264 111 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
C11orf88Q6PI97 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.83□□□□□ -2.12
C11orf88Q6PI97 MIR424-201ENST00000362227 98 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 RNU6-1286P-201ENST00000383871 107 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 Y_RNA.517-201ENST00000384551 106 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 SNORA11.4-201ENST00000408823 129 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 RNU4-26P-201ENST00000410270 107 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 MTCO3P46-201ENST00000425787 232 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 Z82205.1-201ENST00000428456 297 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 MTND1P1-201ENST00000445453 368 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
C11orf88Q6PI97 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.82□□□□□ -2.12
C11orf88Q6PI97 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.81□□□□□ -2.12
C11orf88Q6PI97 RNU4-42P-201ENST00000364738 142 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 MIR514A2-201ENST00000385131 88 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 MIR514A3-201ENST00000385132 88 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 AC019129.1-201ENST00000403786 261 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 Y_RNA.615-201ENST00000410769 117 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 snoU13.30-201ENST00000458951 104 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 AC093534.1-201ENST00000504977 132 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 RNU6-237P-201ENST00000515985 71 ntBASIC1.81□□□□□ -2.12
C11orf88Q6PI97 DEFB131C-201ENST00000528817 165 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms