Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HMGB1P35-201ENST00000503360 598 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.17□□□□□ -2.06
CTR9Q6PD62 AC096745.1-201ENST00000509945 370 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 RNU4-49P-201ENST00000516080 140 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 SNORA31.16-201ENST00000516773 139 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 SNORA48.11-201ENST00000517015 89 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 RN7SKP256-201ENST00000517201 314 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 HSPE1P4-201ENST00000550617 308 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.17□□□□□ -2.06
CTR9Q6PD62 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.17□□□□□ -2.06
CTR9Q6PD62 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.17□□□□□ -2.06
CTR9Q6PD62 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.17□□□□□ -2.06
CTR9Q6PD62 AL109918.3-201ENST00000603072 338 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 AC005296.1-201ENST00000616145 209 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 AC009248.2-201ENST00000619826 254 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 AP000560.1-201ENST00000624150 1937 ntBASIC2.17□□□□□ -2.06
CTR9Q6PD62 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CTR9Q6PD62 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 RNU6-562P-201ENST00000362731 107 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 RNU6-227P-201ENST00000362865 103 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 Y_RNA.301-201ENST00000364990 103 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 MTND3P9-201ENST00000429526 346 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 CYP2C59P-201ENST00000457790 269 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 MTCO1P29-201ENST00000496868 288 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC108210.2-201ENST00000503681 201 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC022447.4-201ENST00000504053 364 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC018710.1-201ENST00000506509 158 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 RNU6-586P-201ENST00000517265 104 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 AL078605.1-201ENST00000603529 500 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AL355297.2-201ENST00000604792 129 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AC018889.1-201ENST00000605372 397 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 AL133215.3-201ENST00000609801 448 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.16□□□□□ -2.06
CTR9Q6PD62 SNORD98-201ENST00000636377 67 ntBASIC2.16□□□□□ -2.06
CTR9Q6PD62 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CTR9Q6PD62 CASC19-280ENST00000642102 1351 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 RNU4-15P-201ENST00000362613 141 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 Y_RNA.151-201ENST00000363566 112 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 RNU6-944P-201ENST00000364023 107 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 RNU6-1283P-201ENST00000365314 105 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 RNA5SP240-201ENST00000365355 128 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.15□□□□□ -2.07
CTR9Q6PD62 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.15□□□□□ -2.07
CTR9Q6PD62 RNU6-329P-201ENST00000459618 107 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 AC018868.1-201ENST00000491307 315 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.15□□□□□ -2.07
CTR9Q6PD62 PTP4A1P4-201ENST00000512479 322 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 AL034555.1-201ENST00000604816 211 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 AC090517.3-201ENST00000625170 141 ntBASIC2.15□□□□□ -2.07
CTR9Q6PD62 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC009541.1-201ENST00000438279 2662 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 SNORA36A-201ENST00000384221 132 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 RNU1-148P-201ENST00000384472 162 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 FGF7P8-201ENST00000402994 292 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AL512604.1-201ENST00000404812 257 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AL590135.1-201ENST00000422215 156 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC019205.3-201ENST00000424573 156 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.14□□□□□ -2.07
CTR9Q6PD62 IFNA20P-201ENST00000436840 528 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC016700.2-201ENST00000446011 156 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 U8.21-201ENST00000459536 136 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC130509.1-201ENST00000464158 433 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC104564.1-201ENST00000493028 407 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC015911.1-201ENST00000495111 156 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 CKS1BP2-201ENST00000497342 240 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 RNU6-273P-201ENST00000516937 96 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.14□□□□□ -2.07
CTR9Q6PD62 MIR3136-201ENST00000583498 78 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 MIR4769-201ENST00000584126 77 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC078795.3-201ENST00000602913 472 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 U4atac.1-201ENST00000618345 95 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC008121.3-201ENST00000618726 433 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC084768.2-201ENST00000622736 221 ntBASIC2.14□□□□□ -2.07
CTR9Q6PD62 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTR9Q6PD62 AC092268.1-201ENST00000342691 405 ntBASIC2.13□□□□□ -2.07
CTR9Q6PD62 SNORA16.1-201ENST00000364597 132 ntBASIC2.13□□□□□ -2.07
CTR9Q6PD62 RNU6-142P-201ENST00000384019 107 ntBASIC2.13□□□□□ -2.07
CTR9Q6PD62 Y_RNA.504-201ENST00000384481 104 ntBASIC2.13□□□□□ -2.07
CTR9Q6PD62 MT-TL1-201ENST00000386347 75 ntBASIC2.13□□□□□ -2.07
CTR9Q6PD62 BTF3L4P2-201ENST00000392798 346 ntBASIC2.13□□□□□ -2.07
CTR9Q6PD62 RNU2-48P-201ENST00000410694 191 ntBASIC2.13□□□□□ -2.07
CTR9Q6PD62 MTCO3P46-201ENST00000425787 232 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms