Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 OR5AK4P-201ENST00000635912 903 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 RNU6-1317P-201ENST00000364582 104 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 RNU6-214P-201ENST00000384130 107 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 MTCO3P46-201ENST00000425787 232 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 MRPS10P2-201ENST00000431226 381 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AL645568.3-201ENST00000433683 316 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 USP9YP28-201ENST00000435142 589 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AL121890.1-201ENST00000435457 205 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AL359672.1-201ENST00000442302 409 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 MTND3P16-201ENST00000452205 344 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 RNU6-1208P-201ENST00000459588 107 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 RPS29P27-201ENST00000463711 170 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AC116337.1-201ENST00000509680 687 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AK6P1-201ENST00000540219 478 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 SCOCP1-201ENST00000554676 349 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AL157687.1-201ENST00000554853 619 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AC011494.1-201ENST00000596454 237 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AC245008.1-201ENST00000608123 476 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AC068792.1-201ENST00000621354 417 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AC022513.1-201ENST00000624512 117 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 FER-210ENST00000628534 558 ntTSL 5 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 MTND5P9-201ENST00000503854 1755 ntBASIC1.57□□□□□ -2.16
NIPAL3Q6P499 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
NIPAL3Q6P499 AL159152.1-201ENST00000635019 2587 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
NIPAL3Q6P499 SNORA18.2-201ENST00000383865 132 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 MTCO3P40-201ENST00000392516 676 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 RNU2-66P-201ENST00000410650 161 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.56□□□□□ -2.16
NIPAL3Q6P499 RPL21P111-201ENST00000418453 477 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.56□□□□□ -2.16
NIPAL3Q6P499 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.56□□□□□ -2.16
NIPAL3Q6P499 SNORD60.2-201ENST00000516883 86 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.56□□□□□ -2.16
NIPAL3Q6P499 AC104581.2-201ENST00000572227 430 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 Z99129.1-201ENST00000612510 255 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 AC124864.2-201ENST00000624736 186 ntBASIC1.56□□□□□ -2.16
NIPAL3Q6P499 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 MIR424-201ENST00000362227 98 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 Y_RNA.51-201ENST00000362725 102 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 Y_RNA.123-201ENST00000363338 102 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 SNORA29-201ENST00000384183 140 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 EIF4E2P1-201ENST00000393781 255 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 RNA5SP494-201ENST00000410653 129 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 HMGB1P18-201ENST00000438801 619 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 ATP5J2P3-201ENST00000451550 258 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AC010531.2-201ENST00000465012 153 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AC027575.1-201ENST00000481064 460 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AC107401.1-201ENST00000503426 685 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AC096745.1-201ENST00000509945 370 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 FAM206BP-201ENST00000510179 541 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 RNU6-835P-201ENST00000516974 104 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 NBR2-204ENST00000587322 63 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 AC010928.2-201ENST00000588017 287 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
NIPAL3Q6P499 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.55□□□□□ -2.16
NIPAL3Q6P499 RNU6-562P-201ENST00000362731 107 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 RNU6-112P-201ENST00000363599 104 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 RNU6-968P-201ENST00000384076 107 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 SNORD116-2-201ENST00000384274 95 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 RNU6-933P-201ENST00000384424 107 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 SNORD116-6-201ENST00000384711 96 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NIPAL3Q6P499 RNU6-648P-201ENST00000410190 107 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 USP9YP14-201ENST00000430663 563 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 MTCO1P44-201ENST00000441935 243 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AMD1P1-201ENST00000457220 922 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AC087477.1-201ENST00000465747 340 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AC025465.3-201ENST00000510570 311 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.54□□□□□ -2.16
NIPAL3Q6P499 HMGB1P33-201ENST00000563485 527 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms