Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNA5SP108-201ENST00000605921 117 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 AC106754.2-201ENST00000623006 233 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 U2.21-201ENST00000637295 81 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 Y_RNA.243-201ENST00000364481 109 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 RNA5SP167-201ENST00000365461 116 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 RNU6-880P-201ENST00000384526 107 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 FTH1P15-201ENST00000406984 280 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 AC092047.1-201ENST00000424997 240 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 AC245047.4-201ENST00000433189 144 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 AP004371.1-201ENST00000525240 214 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 GNRHR2P1-201ENST00000555315 631 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 AC138915.1-201ENST00000565427 1685 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 Z82209.1-201ENST00000422141 2135 ntBASIC4.72□□□□□ -1.65
RC3H1Q5TC82 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RC3H1Q5TC82 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
RC3H1Q5TC82 U8.1-201ENST00000362843 134 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 SNORD58C-201ENST00000365223 64 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 Y_RNA.388-201ENST00000383919 113 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 SNORA48.2-201ENST00000390926 124 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 RNA5SP424-201ENST00000390988 115 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.71□□□□□ -1.66
RC3H1Q5TC82 AC019205.3-201ENST00000424573 156 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 AC005326.1-201ENST00000429197 123 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 HLA-N-201ENST00000437516 135 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 RPL31P41-201ENST00000477967 372 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 SNORA70.16-201ENST00000516390 95 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 SNORA31.16-201ENST00000516773 139 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 AL137849.1-201ENST00000604767 169 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 uc_338.28-201ENST00000612082 187 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 AL591424.2-201ENST00000617023 128 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RC3H1Q5TC82 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.71□□□□□ -1.66
RC3H1Q5TC82 AC022336.2-201ENST00000568966 2538 ntBASIC4.71□□□□□ -1.66
RC3H1Q5TC82 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 AC058791.1-201ENST00000608412 3198 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 RNU6-778P-201ENST00000363269 103 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 Y_RNA.120-201ENST00000363304 110 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 HDGFP1-201ENST00000405943 252 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 MIR378D2-201ENST00000580636 98 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 MIR7851-201ENST00000610611 160 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 MIR3529-201ENST00000637713 78 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 AC018555.1-201ENST00000567548 1980 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 SCN1A-220ENST00000641603 12506 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
RC3H1Q5TC82 ADAM3A-203ENST00000461344 2157 ntBASIC4.7□□□□□ -1.66
RC3H1Q5TC82 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 RNU6-294P-201ENST00000364999 102 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 MIR3074-201ENST00000384885 81 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 AC006028.1-201ENST00000438379 402 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 AC010285.1-201ENST00000470580 392 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 Vault.1-201ENST00000516474 102 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 CYP4A27P-201ENST00000567218 190 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 AL031274.2-201ENST00000599419 203 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 MIR8058-201ENST00000615737 89 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 MIR7154-201ENST00000620673 73 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 MIR8057-201ENST00000620957 69 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 AP000553.6-201ENST00000641242 118 ntBASIC4.69□□□□□ -1.66
RC3H1Q5TC82 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RC3H1Q5TC82 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 U3.26-201ENST00000391236 204 ntBASIC4.68□□□□□ -1.66
RC3H1Q5TC82 RNU6-383P-201ENST00000410864 94 ntBASIC4.68□□□□□ -1.66
RC3H1Q5TC82 Y_RNA.617-201ENST00000410920 90 ntBASIC4.68□□□□□ -1.66
RC3H1Q5TC82 MLLT10P1-201ENST00000418346 262 ntBASIC4.68□□□□□ -1.66
RC3H1Q5TC82 AC005300.1-201ENST00000428401 373 ntBASIC4.68□□□□□ -1.66
RC3H1Q5TC82 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 AC090525.1-201ENST00000479116 478 ntBASIC4.68□□□□□ -1.66
RC3H1Q5TC82 AC093331.1-201ENST00000521474 169 ntBASIC4.68□□□□□ -1.66
RC3H1Q5TC82 FTX_3.1-201ENST00000610451 147 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms