Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC93Q567U6 RPL19P1-201ENST00000411635 428 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 EIF1AXP1-201ENST00000419267 435 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 AC007098.1-201ENST00000420122 367 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 RPL23AP95-201ENST00000426806 265 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC93Q567U6 RN7SKP210-201ENST00000459176 261 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 AC103975.1-201ENST00000482506 483 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC93Q567U6 AC091874.1-201ENST00000511402 339 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 RNU4-77P-201ENST00000516692 156 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 MIR3117-201ENST00000584034 78 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 AC136443.5-201ENST00000603741 370 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 MIR1244-1-201ENST00000612829 85 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC93Q567U6 AL606534.2-204ENST00000635008 178 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 MIR1244-3-201ENST00000635744 85 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 MIR1244-2-201ENST00000636449 85 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 MIR1244-4-202ENST00000636813 85 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC93Q567U6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC93Q567U6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 AP006437.1-201ENST00000641440 3685 ntBASIC3.2□□□□□ -1.9
CCDC93Q567U6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 RNU6-968P-201ENST00000384076 107 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 RNU6-622P-201ENST00000384272 103 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 MIR518C-201ENST00000384822 101 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 RNA5SP390-201ENST00000410191 113 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 RN7SKP223-201ENST00000410582 62 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 RNA5SP494-201ENST00000410653 129 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 AC092423.1-201ENST00000430165 186 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 RNU6-475P-201ENST00000516073 104 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 Y_RNA.720-201ENST00000517166 92 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 AC090897.2-201ENST00000581715 130 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 AL391813.1-201ENST00000603098 260 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 7SK.7-201ENST00000603504 247 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC93Q567U6 AC233981.2-201ENST00000611524 1614 ntBASIC3.19□□□□□ -1.9
CCDC93Q567U6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC93Q567U6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC93Q567U6 RNU4-42P-201ENST00000364738 142 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 Y_RNA.459-201ENST00000384251 102 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 MTCYBP2-201ENST00000407745 171 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 RNU6-985P-201ENST00000410182 104 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC93Q567U6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC93Q567U6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC93Q567U6 AL353752.1-201ENST00000454946 260 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 AC015911.1-201ENST00000495111 156 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 MRPS36P4-201ENST00000534436 298 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC93Q567U6 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 MIR4635-201ENST00000583759 79 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC93Q567U6 AL356280.1-201ENST00000603614 379 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 SNORD58B-201ENST00000607313 66 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 AL162373.1-201ENST00000620433 407 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC93Q567U6 MIR4272-201ENST00000635924 64 ntBASIC3.18□□□□□ -1.9
CCDC93Q567U6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC93Q567U6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC93Q567U6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 RNU6-1286P-201ENST00000383871 107 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 RNU6-1222P-201ENST00000384615 107 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 SNORA12.2-201ENST00000391040 156 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC93Q567U6 AL358453.1-201ENST00000422522 250 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 AL441985.1-201ENST00000457727 251 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 MTND5P22-201ENST00000458380 195 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 SNRPGP7-201ENST00000469016 106 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 AC104564.1-201ENST00000493028 407 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 RNU5B-3P-201ENST00000516601 115 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 AC144568.1-201ENST00000520139 137 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC93Q567U6 AC104581.2-201ENST00000572227 430 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC93Q567U6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 AL138825.1-201ENST00000618587 192 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC93Q567U6 MIR7157-201ENST00000635801 60 ntBASIC3.17□□□□□ -1.9
CCDC93Q567U6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC93Q567U6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC93Q567U6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC93Q567U6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC93Q567U6 RNY3P11-201ENST00000364153 102 ntBASIC3.16□□□□□ -1.9
CCDC93Q567U6 RNU4-9P-201ENST00000364951 139 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms