Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC073910.1-201ENST00000445047 438 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 RPL36AP48-201ENST00000485521 314 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 RPL30P1-201ENST00000488676 339 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 RNU6-408P-201ENST00000515910 100 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 RNU6-1143P-201ENST00000516125 104 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 AC090517.1-201ENST00000569307 266 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 MIR5701-3-201ENST00000578890 82 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 MIR5701-1-201ENST00000585138 82 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 MIR5701-2-201ENST00000615634 82 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 AL138825.1-201ENST00000618587 192 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 AC078938.1-201ENST00000620993 318 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 RNU6-968P-201ENST00000384076 107 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 SNORA18.3-201ENST00000384122 132 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.551-201ENST00000384661 102 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 RNU6-713P-201ENST00000384761 107 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AC063976.3-201ENST00000426849 329 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 MTCO3P29-201ENST00000432119 779 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 Z82188.1-201ENST00000436709 154 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AC093852.1-201ENST00000503587 266 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AC023157.2-201ENST00000540596 141 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AL109809.4-201ENST00000603520 2185 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 AL159153.1-201ENST00000619688 317 ntBASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC44A4Q53GD3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNA5SP432-201ENST00000362480 116 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 SNORA46-201ENST00000384762 135 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 SNORA69.1-201ENST00000390904 137 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNU6-700P-201ENST00000391043 107 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNU6-847P-201ENST00000411115 108 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC007098.1-201ENST00000420122 367 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC087499.2-201ENST00000432861 149 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 GPM6BP3-201ENST00000442797 145 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNA5SP76-201ENST00000516277 87 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 SNORA31.16-201ENST00000516773 139 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNU6-897P-201ENST00000517135 105 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 HSPE1P20-201ENST00000538133 289 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC107016.2-201ENST00000547968 190 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC007375.1-201ENST00000554513 578 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC105137.2-201ENST00000569073 466 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 RNU6-91P-201ENST00000607774 107 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 uc_338.14-201ENST00000613162 166 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AL450472.1-202ENST00000637286 180 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC010615.1-201ENST00000594254 1764 ntBASIC3.05□□□□□ -1.92
SLC44A4Q53GD3 AC233981.2-201ENST00000611524 1614 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.19-201ENST00000362462 99 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 SNORD114-19-201ENST00000363072 75 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.257-201ENST00000364596 102 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 MIR1302-6-201ENST00000408466 90 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 AC009310.1-201ENST00000414414 451 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 AC244670.1-201ENST00000436879 112 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 SNORD127-201ENST00000458892 86 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 RNU6-1132P-201ENST00000459214 107 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 AF186996.7-201ENST00000492781 209 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 RNU2-53P-201ENST00000516257 147 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 RNU6-56P-201ENST00000516986 93 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 MIR7515-201ENST00000637837 67 ntBASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A4Q53GD3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms