Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL355816.2-201ENST00000610049 647 ntBASIC-0.17□□□□□ -2.44
HMGXB3Q12766 RNA5SP264-201ENST00000363115 107 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 SNORD56.4-201ENST00000363883 71 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 MIR301A-201ENST00000385261 86 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AC022364.2-201ENST00000457963 554 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AC091163.3-201ENST00000518269 1144 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AL157871.3-201ENST00000557231 293 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 MIR3136-201ENST00000583498 78 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AL078595.3-201ENST00000623815 1166 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 RNU6-216P-201ENST00000363282 104 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 SNORA42.1-201ENST00000363515 137 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 RNU6-796P-201ENST00000391086 107 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AC016831.2-201ENST00000417179 352 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 MTND4P19-201ENST00000446659 478 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AL592221.1-201ENST00000605266 382 ntBASIC-0.18□□□□□ -2.44
HMGXB3Q12766 AC092268.1-201ENST00000342691 405 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 MIR140-201ENST00000385282 100 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AL355796.1-201ENST00000406706 323 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 RNA5SP504-201ENST00000410676 117 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 RNU6-575P-201ENST00000411326 105 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.19□□□□□ -2.44
HMGXB3Q12766 ELOCP30-201ENST00000447108 299 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AC093534.1-201ENST00000504977 132 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AC027338.1-201ENST00000514840 825 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AC069113.3-201ENST00000521019 150 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AP001189.2-201ENST00000527320 189 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 AC011979.2-201ENST00000527568 352 ntBASIC-0.19□□□□□ -2.44
HMGXB3Q12766 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.19□□□□□ -2.44
HMGXB3Q12766 SNORD116-20-201ENST00000384529 92 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 SNORA32.3-201ENST00000384772 121 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 RNA5SP496-201ENST00000391240 109 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 C1DP2-201ENST00000418167 426 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 MTND4P25-201ENST00000441039 533 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.2□□□□□ -2.44
HMGXB3Q12766 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.2□□□□□ -2.44
HMGXB3Q12766 AC003071.1-201ENST00000451219 789 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 C1DP4-201ENST00000455429 424 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 snoU13.25-201ENST00000458945 104 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 RNU6-863P-201ENST00000515989 104 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 RNU2-12P-201ENST00000517216 168 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 AC092325.1-201ENST00000566449 554 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.2□□□□□ -2.44
HMGXB3Q12766 AL357312.1-201ENST00000603879 298 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 AL136317.1-201ENST00000612653 226 ntBASIC-0.2□□□□□ -2.44
HMGXB3Q12766 RNU6-877P-201ENST00000383868 107 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 RNU4-27P-201ENST00000410889 139 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 RNU6-177P-201ENST00000411257 104 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.21□□□□□ -2.44
HMGXB3Q12766 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
HMGXB3Q12766 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGXB3Q12766 HMGB1P28-201ENST00000507778 552 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGXB3Q12766 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGXB3Q12766 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.21□□□□□ -2.44
HMGXB3Q12766 AC025678.1-201ENST00000567861 338 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 MIR5695-201ENST00000579717 85 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 MIR4742-201ENST00000581069 85 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 MIR8064-201ENST00000612863 90 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 AC078938.1-201ENST00000620993 318 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 AL445264.1-201ENST00000621719 171 ntBASIC-0.21□□□□□ -2.44
HMGXB3Q12766 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.21□□□□□ -2.44
HMGXB3Q12766 SNORD32B-201ENST00000364460 84 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 RNU6-534P-201ENST00000364877 106 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 SNORA72.2-201ENST00000365028 127 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 SNORD51.1-201ENST00000365405 77 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 MIR653-201ENST00000385279 96 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 MTND1P20-201ENST00000430341 950 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 MTND2P6-201ENST00000455337 1030 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.22□□□□□ -2.44
HMGXB3Q12766 SUB1P2-201ENST00000556401 297 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 AC022523.2-201ENST00000561045 150 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 AC008147.4-201ENST00000617570 1204 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 AC136475.10-201ENST00000620253 385 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 AC104985.3-201ENST00000623479 597 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 AL157786.1-207ENST00000627771 695 ntBASIC-0.22□□□□□ -2.44
HMGXB3Q12766 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.23□□□□□ -2.45
HMGXB3Q12766 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
HMGXB3Q12766 AL034345.1-201ENST00000407768 123 ntBASIC-0.23□□□□□ -2.45
HMGXB3Q12766 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.23□□□□□ -2.45
HMGXB3Q12766 AL353777.1-201ENST00000425552 326 ntBASIC-0.23□□□□□ -2.45
HMGXB3Q12766 DPRXP1-201ENST00000426312 460 ntBASIC-0.23□□□□□ -2.45
HMGXB3Q12766 RPL23AP50-201ENST00000434149 455 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms