Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MTND1P34-201ENST00000438556 671 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.94□□□□□ -2.1
GABPAQ06546 HMGN2P26-201ENST00000463169 339 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.94□□□□□ -2.1
GABPAQ06546 SCOCP1-201ENST00000554676 349 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.94□□□□□ -2.1
GABPAQ06546 AC104458.1-201ENST00000608243 463 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 RMST_3.1-201ENST00000611651 109 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 U4.5-201ENST00000617137 123 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
GABPAQ06546 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
GABPAQ06546 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.93□□□□□ -2.1
GABPAQ06546 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
GABPAQ06546 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 RNU6-877P-201ENST00000383868 107 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 Y_RNA.453-201ENST00000384223 109 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 Y_RNA.573-201ENST00000384763 105 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 SNORD115-47-201ENST00000391226 86 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 RNU6-325P-201ENST00000411132 105 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 VN1R36P-201ENST00000414936 291 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.93□□□□□ -2.1
GABPAQ06546 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.93□□□□□ -2.1
GABPAQ06546 AC092989.1-201ENST00000481235 277 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 PTP4A1P4-201ENST00000512479 322 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.93□□□□□ -2.1
GABPAQ06546 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.93□□□□□ -2.1
GABPAQ06546 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
GABPAQ06546 AC021231.3-201ENST00000558497 370 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 MIR4529-201ENST00000578110 78 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 AC100830.2-201ENST00000581636 240 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 AC007229.1-201ENST00000590455 412 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.93□□□□□ -2.1
GABPAQ06546 FAM157A-202ENST00000615155 405 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 AL162373.1-201ENST00000620433 407 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 AC098657.3-201ENST00000620434 263 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 AL450472.1-202ENST00000637286 180 ntBASIC1.93□□□□□ -2.1
GABPAQ06546 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
GABPAQ06546 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GABPAQ06546 Y_RNA.89-201ENST00000363031 102 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 SNORD32B-201ENST00000364460 84 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 Y_RNA.295-201ENST00000364918 102 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 RNU6-378P-201ENST00000384324 107 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 MTCYBP2-201ENST00000407745 171 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 MIR1262-201ENST00000408276 93 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 MIR548F1-201ENST00000408667 84 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AL030996.1-201ENST00000411430 235 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPAQ06546 BTF3P4-201ENST00000418852 495 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPAQ06546 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.92□□□□□ -2.1
GABPAQ06546 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPAQ06546 AC245102.2-201ENST00000448956 180 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 RNA5SP233-201ENST00000459153 113 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AC007547.1-201ENST00000462177 490 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 RPS29P27-201ENST00000463711 170 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AC114801.2-201ENST00000503825 781 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPAQ06546 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.92□□□□□ -2.1
GABPAQ06546 MIR4498-201ENST00000577599 66 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPAQ06546 Z98751.3-201ENST00000604447 521 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 AP000654.2-201ENST00000605633 586 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 SNORA43.4-201ENST00000629559 138 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
GABPAQ06546 AC068137.4-201ENST00000638485 296 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.92□□□□□ -2.1
GABPAQ06546 AC073869.6-201ENST00000640656 341 ntBASIC1.92□□□□□ -2.1
GABPAQ06546 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
GABPAQ06546 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
GABPAQ06546 U3.9-201ENST00000363823 204 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 RNU6-26P-201ENST00000383985 107 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 RNU6-933P-201ENST00000384424 107 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 Y_RNA.530-201ENST00000384587 101 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 MIR521-1-201ENST00000384902 87 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 MIR518A2-201ENST00000384966 87 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 Y_RNA.595-201ENST00000410403 105 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 RNU6-373P-201ENST00000411247 98 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 SNRPEP10-201ENST00000420249 274 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 AC012306.1-201ENST00000423267 114 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.91□□□□□ -2.1
GABPAQ06546 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.91□□□□□ -2.1
GABPAQ06546 AC093259.1-201ENST00000509755 300 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 RNU6-718P-201ENST00000516166 105 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 RNU6-567P-201ENST00000516746 107 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.91□□□□□ -2.1
GABPAQ06546 AC078899.2-201ENST00000595282 212 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 AC068790.6-201ENST00000602558 258 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 PCGEM1.1-201ENST00000613431 131 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 AC090517.2-201ENST00000614966 680 ntBASIC1.91□□□□□ -2.1
GABPAQ06546 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
GABPAQ06546 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms