Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIR3923-201ENST00000579521 83 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 AL356157.2-201ENST00000605122 111 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 PCGEM1.1-201ENST00000613431 131 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
HMGCS1Q01581 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC092268.1-201ENST00000342691 405 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 RNA5SP99-201ENST00000364020 114 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 RNU6-1329P-201ENST00000365664 107 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 RPS29P27-201ENST00000463711 170 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC091885.1-201ENST00000506658 268 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC092436.3-201ENST00000511788 257 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 SNORA19.2-201ENST00000516013 114 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 RNU6-1281P-201ENST00000516223 105 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 SNORD60.2-201ENST00000516883 86 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 RNU6-612P-201ENST00000516909 102 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC087854.1-201ENST00000519706 414 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 Z98751.3-201ENST00000604447 521 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AP000654.2-201ENST00000605633 586 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 RNU6-89P-201ENST00000606519 100 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC093783.1-201ENST00000612976 329 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 U1.36-201ENST00000620684 176 ntBASIC1.44□□□□□ -2.18
HMGCS1Q01581 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGCS1Q01581 Y_RNA.231-201ENST00000364358 102 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 SNORD114-6-201ENST00000364393 72 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 RNU6-522P-201ENST00000364497 107 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 RNU6-1317P-201ENST00000364582 104 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 RNU6-26P-201ENST00000383985 107 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 RNU6-482P-201ENST00000391068 107 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 RNU2-41P-201ENST00000410991 178 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 MTCO3P41-201ENST00000414801 328 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 UBE2V1P4-201ENST00000425374 344 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGCS1Q01581 MTND3P9-201ENST00000429526 346 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 AL589823.1-201ENST00000429577 183 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.43□□□□□ -2.18
HMGCS1Q01581 RNU6-1037P-201ENST00000459571 107 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 RPL9P9-202ENST00000466501 579 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 AC021146.2-201ENST00000504736 556 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 AC025465.4-201ENST00000513422 638 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 Y_RNA.675-201ENST00000516389 149 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 AL157687.1-201ENST00000554853 619 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 HMGB1P33-201ENST00000563485 527 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 AC010525.2-201ENST00000590920 195 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 FAM157A-202ENST00000615155 405 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCS1Q01581 OR4G1P-203ENST00000641984 1631 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMGCS1Q01581 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMGCS1Q01581 MTND5P10-201ENST00000603719 1809 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
HMGCS1Q01581 AC009541.1-201ENST00000438279 2662 ntBASIC1.43□□□□□ -2.18
HMGCS1Q01581 MIR126-201ENST00000362291 85 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU1-58P-201ENST00000362413 163 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 Y_RNA.38-201ENST00000362617 102 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 Y_RNA.99-201ENST00000363138 105 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU4-56P-201ENST00000364700 142 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 Y_RNA.318-201ENST00000365131 97 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU6-1106P-201ENST00000390845 107 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU6-908P-201ENST00000410160 94 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 MRPS10P2-201ENST00000431226 381 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 SEPT14P3-201ENST00000439401 183 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 AL359672.1-201ENST00000442302 409 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 AL732372.2-207ENST00000445840 183 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 MTCO2P7-201ENST00000446518 666 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGCS1Q01581 SEPT14P2-201ENST00000453405 183 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 ATP5EP1-201ENST00000510257 156 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 SEPT14P4-201ENST00000513445 186 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU6-506P-201ENST00000516553 94 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU6-314P-201ENST00000516574 104 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU6-1332P-201ENST00000516666 104 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNA5SP490-201ENST00000517141 136 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 FO082796.1-201ENST00000523795 183 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 CYP4A27P-201ENST00000567218 190 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 MIR4769-201ENST00000584126 77 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 AL162413.1-201ENST00000603198 110 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 AC068137.3-201ENST00000639191 341 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 AC099654.12-201ENST00000639868 649 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms