Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.67□□□□□ -1.98
RAE1P78406 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RAE1P78406 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RAE1P78406 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAE1P78406 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.66□□□□□ -1.98
RAE1P78406 SNORA18.3-201ENST00000384122 132 ntBASIC2.66□□□□□ -1.98
RAE1P78406 Y_RNA.551-201ENST00000384661 102 ntBASIC2.66□□□□□ -1.98
RAE1P78406 EEF1A1P41-201ENST00000414667 207 ntBASIC2.66□□□□□ -1.98
RAE1P78406 DPH3P2-201ENST00000422618 250 ntBASIC2.66□□□□□ -1.98
RAE1P78406 SDAD1P3-201ENST00000427380 333 ntBASIC2.66□□□□□ -1.98
RAE1P78406 RPL30P4-201ENST00000429309 333 ntBASIC2.66□□□□□ -1.98
RAE1P78406 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.66□□□□□ -1.98
RAE1P78406 AC010655.3-201ENST00000478818 450 ntBASIC2.66□□□□□ -1.98
RAE1P78406 AC145146.1-201ENST00000496370 254 ntBASIC2.66□□□□□ -1.98
RAE1P78406 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.66□□□□□ -1.98
RAE1P78406 AC125232.2-201ENST00000592457 143 ntBASIC2.66□□□□□ -1.98
RAE1P78406 AL670379.2-201ENST00000604983 252 ntBASIC2.66□□□□□ -1.98
RAE1P78406 PRR13P7-201ENST00000605538 430 ntBASIC2.66□□□□□ -1.98
RAE1P78406 PCGEM1.1-201ENST00000613431 131 ntBASIC2.66□□□□□ -1.98
RAE1P78406 AC069528.2-201ENST00000624849 1991 ntBASIC2.66□□□□□ -1.98
RAE1P78406 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RAE1P78406 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAE1P78406 AC108206.1-201ENST00000570186 4159 ntBASIC2.66□□□□□ -1.98
RAE1P78406 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RAE1P78406 AC073346.2-201ENST00000624724 2058 ntBASIC2.65□□□□□ -1.98
RAE1P78406 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RAE1P78406 snoU2_19.1-201ENST00000362361 80 ntBASIC2.65□□□□□ -1.99
RAE1P78406 RNU6-1301P-201ENST00000362724 104 ntBASIC2.65□□□□□ -1.99
RAE1P78406 RNU1-72P-201ENST00000362976 153 ntBASIC2.65□□□□□ -1.99
RAE1P78406 Y_RNA.152-201ENST00000363578 100 ntBASIC2.65□□□□□ -1.99
RAE1P78406 RNU5F-3P-201ENST00000363767 117 ntBASIC2.65□□□□□ -1.99
RAE1P78406 Y_RNA.276-201ENST00000364732 109 ntBASIC2.65□□□□□ -1.99
RAE1P78406 SNORD21-201ENST00000383953 95 ntBASIC2.65□□□□□ -1.99
RAE1P78406 RNU6-708P-201ENST00000384217 107 ntBASIC2.65□□□□□ -1.99
RAE1P78406 MIR29B2-201ENST00000385055 81 ntBASIC2.65□□□□□ -1.99
RAE1P78406 SNORA46.1-201ENST00000391069 153 ntBASIC2.65□□□□□ -1.99
RAE1P78406 RNU6-1093P-201ENST00000391194 107 ntBASIC2.65□□□□□ -1.99
RAE1P78406 U6atac.2-201ENST00000408644 118 ntBASIC2.65□□□□□ -1.99
RAE1P78406 SNORD88.1-201ENST00000408684 91 ntBASIC2.65□□□□□ -1.99
RAE1P78406 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.65□□□□□ -1.99
RAE1P78406 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.65□□□□□ -1.99
RAE1P78406 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.65□□□□□ -1.99
RAE1P78406 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.65□□□□□ -1.99
RAE1P78406 MTATP8P1-201ENST00000467115 207 ntBASIC2.65□□□□□ -1.99
RAE1P78406 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.65□□□□□ -1.99
RAE1P78406 SCARNA3-201ENST00000517097 143 ntBASIC2.65□□□□□ -1.99
RAE1P78406 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.65□□□□□ -1.99
RAE1P78406 AC131281.1-201ENST00000522984 164 ntBASIC2.65□□□□□ -1.99
RAE1P78406 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.65□□□□□ -1.99
RAE1P78406 HSPE1P20-201ENST00000538133 289 ntBASIC2.65□□□□□ -1.99
RAE1P78406 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.65□□□□□ -1.99
RAE1P78406 UBL5P4-201ENST00000562584 236 ntBASIC2.65□□□□□ -1.99
RAE1P78406 MIR5695-201ENST00000579717 85 ntBASIC2.65□□□□□ -1.99
RAE1P78406 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RAE1P78406 MIR4325-201ENST00000583049 90 ntBASIC2.65□□□□□ -1.99
RAE1P78406 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
RAE1P78406 ZNF861P-201ENST00000588126 639 ntBASIC2.65□□□□□ -1.99
RAE1P78406 AL162274.2-201ENST00000614406 332 ntBASIC2.65□□□□□ -1.99
RAE1P78406 AC008121.3-201ENST00000618726 433 ntBASIC2.65□□□□□ -1.99
RAE1P78406 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.65□□□□□ -1.99
RAE1P78406 U6.92-201ENST00000636464 89 ntBASIC2.65□□□□□ -1.99
RAE1P78406 BX322639.1-202ENST00000423987 2213 ntBASIC2.65□□□□□ -1.99
RAE1P78406 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.64□□□□□ -1.99
RAE1P78406 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RAE1P78406 MIR26A1-201ENST00000362205 77 ntBASIC2.64□□□□□ -1.99
RAE1P78406 U3.9-201ENST00000363823 204 ntBASIC2.64□□□□□ -1.99
RAE1P78406 RNU6-280P-201ENST00000364145 104 ntBASIC2.64□□□□□ -1.99
RAE1P78406 RNU6-245P-201ENST00000384020 107 ntBASIC2.64□□□□□ -1.99
RAE1P78406 RNU6-378P-201ENST00000384324 107 ntBASIC2.64□□□□□ -1.99
RAE1P78406 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
RAE1P78406 SNORD78.2-201ENST00000391076 69 ntBASIC2.64□□□□□ -1.99
RAE1P78406 RN7SKP123-201ENST00000410732 291 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC073910.1-201ENST00000445047 438 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.64□□□□□ -1.99
RAE1P78406 S100A11P2-201ENST00000467589 312 ntBASIC2.64□□□□□ -1.99
RAE1P78406 MRPS35P2-201ENST00000508242 191 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.64□□□□□ -1.99
RAE1P78406 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.64□□□□□ -1.99
RAE1P78406 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
RAE1P78406 SNORA74D-201ENST00000516404 141 ntBASIC2.64□□□□□ -1.99
RAE1P78406 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.64□□□□□ -1.99
RAE1P78406 EIF4A1P12-201ENST00000551910 141 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC026470.2-201ENST00000561492 181 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC105245.1-201ENST00000581934 244 ntBASIC2.64□□□□□ -1.99
RAE1P78406 MIR3199-1-201ENST00000582434 88 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.64□□□□□ -1.99
RAE1P78406 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
RAE1P78406 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.64□□□□□ -1.99
RAE1P78406 AL121655.1-201ENST00000605811 308 ntBASIC2.64□□□□□ -1.99
RAE1P78406 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.64□□□□□ -1.99
RAE1P78406 AC005296.1-201ENST00000616145 209 ntBASIC2.64□□□□□ -1.99
RAE1P78406 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.64□□□□□ -1.99
RAE1P78406 MIR6733-201ENST00000635723 61 ntBASIC2.64□□□□□ -1.99
RAE1P78406 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAE1P78406 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.64□□□□□ -1.99
RAE1P78406 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAE1P78406 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAE1P78406 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms