Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.4□□□□□ -2.19
CCNA1P78396 AP005597.4-201ENST00000526762 229 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.4□□□□□ -2.19
CCNA1P78396 MIR5583-1-201ENST00000580941 59 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.4□□□□□ -2.19
CCNA1P78396 AC025449.1-201ENST00000603896 529 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 AC069114.2-201ENST00000604699 304 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.4□□□□□ -2.19
CCNA1P78396 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 AC009161.2-201ENST00000624626 138 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 RNU2-7P-201ENST00000410794 178 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.39□□□□□ -2.19
CCNA1P78396 MTCO2P11-201ENST00000431069 680 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.39□□□□□ -2.19
CCNA1P78396 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.39□□□□□ -2.19
CCNA1P78396 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.39□□□□□ -2.19
CCNA1P78396 AC079140.2-201ENST00000506193 142 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.39□□□□□ -2.19
CCNA1P78396 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.39□□□□□ -2.19
CCNA1P78396 MIR449C-201ENST00000516047 92 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 AC109479.2-201ENST00000517842 174 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 RAB11AP2-201ENST00000545905 639 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 AC005668.1-201ENST00000571142 476 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 AC008536.2-201ENST00000607284 349 ntBASIC1.39□□□□□ -2.19
CCNA1P78396 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCNA1P78396 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.39□□□□□ -2.19
CCNA1P78396 RNU6-266P-201ENST00000364225 107 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 RNU6-1141P-201ENST00000364520 107 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 RNU6-348P-201ENST00000384386 107 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 RNU6-296P-201ENST00000384608 107 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 RNU6-606P-201ENST00000384721 111 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
CCNA1P78396 RPS4XP11-201ENST00000446897 772 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 SCARNA18-201ENST00000459004 134 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 BET1P1-201ENST00000482276 359 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 AC079382.1-201ENST00000493346 557 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 Y_RNA.695-201ENST00000516715 107 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 SNORA25.17-201ENST00000517184 124 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 AGGF1P4-201ENST00000568249 801 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 BNIP3P16-201ENST00000589779 534 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 AC110760.3-201ENST00000598794 467 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 AC072046.2-201ENST00000618366 268 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 AC136475.10-201ENST00000620253 385 ntBASIC1.38□□□□□ -2.19
CCNA1P78396 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CCNA1P78396 RNU1-62P-201ENST00000362599 164 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 RNU6-552P-201ENST00000362869 119 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 SNORD1A-201ENST00000364968 72 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 RNU6-43P-201ENST00000384302 107 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 RNU6-434P-201ENST00000384376 107 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 MTCYBP2-201ENST00000407745 171 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.37□□□□□ -2.19
CCNA1P78396 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.37□□□□□ -2.19
CCNA1P78396 AL117339.3-201ENST00000418733 162 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 C8orf59P1-201ENST00000429930 303 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 CETN4P-201ENST00000432407 469 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.37□□□□□ -2.19
CCNA1P78396 USP9YP29-201ENST00000445112 563 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.37□□□□□ -2.19
CCNA1P78396 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC093852.1-201ENST00000503587 266 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.37□□□□□ -2.19
CCNA1P78396 AC079140.3-201ENST00000511111 550 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.37□□□□□ -2.19
CCNA1P78396 SNORA31.16-201ENST00000516773 139 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.37□□□□□ -2.19
CCNA1P78396 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.37□□□□□ -2.19
CCNA1P78396 RRN3P3-201ENST00000549207 578 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 MTND3P12-201ENST00000559068 328 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AL391840.1-201ENST00000571144 367 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AP005136.1-201ENST00000579765 429 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 MIR4295-201ENST00000585286 85 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC008752.3-201ENST00000588113 712 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 RSL24D1P11-201ENST00000591045 491 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC068790.2-201ENST00000602601 557 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC091805.2-201ENST00000603848 235 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC121247.2-201ENST00000604776 136 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AL356157.2-201ENST00000605122 111 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCNA1P78396 uc_338.11-201ENST00000619132 160 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 AC022513.1-201ENST00000624512 117 ntBASIC1.37□□□□□ -2.19
CCNA1P78396 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.36□□□□□ -2.19
CCNA1P78396 RNU6-1080P-201ENST00000383982 107 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 Y_RNA.480-201ENST00000384364 102 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AL049545.1-201ENST00000401856 572 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 MTATP6P18-201ENST00000417994 673 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 SNRPEP10-201ENST00000420249 274 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AL590135.1-201ENST00000422215 156 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AC019205.3-201ENST00000424573 156 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AC010975.2-201ENST00000427781 588 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AC244670.1-201ENST00000436879 112 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 HSPE1P9-201ENST00000440046 311 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AC027119.1-201ENST00000440877 241 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AC016700.2-201ENST00000446011 156 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms