Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP000240.1-201ENST00000609910 452 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AL391834.2-201ENST00000609982 546 ntBASIC0.79□□□□□ -2.28
ACTBP60709 TUSC7.1-201ENST00000610969 165 ntBASIC0.79□□□□□ -2.28
ACTBP60709 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
ACTBP60709 AC022418.1-201ENST00000624118 445 ntBASIC0.79□□□□□ -2.28
ACTBP60709 SNORA43.4-201ENST00000629559 138 ntBASIC0.79□□□□□ -2.28
ACTBP60709 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
ACTBP60709 Y_RNA.269-201ENST00000364685 89 ntBASIC0.78□□□□□ -2.28
ACTBP60709 RNU6-331P-201ENST00000384724 107 ntBASIC0.78□□□□□ -2.28
ACTBP60709 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.78□□□□□ -2.28
ACTBP60709 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.78□□□□□ -2.28
ACTBP60709 MTCO3P7-201ENST00000510008 774 ntBASIC0.78□□□□□ -2.28
ACTBP60709 AC091874.1-201ENST00000511402 339 ntBASIC0.78□□□□□ -2.28
ACTBP60709 MTATP6P9-201ENST00000515039 680 ntBASIC0.78□□□□□ -2.28
ACTBP60709 RNU6-311P-201ENST00000516224 102 ntBASIC0.78□□□□□ -2.28
ACTBP60709 RNU6-1041P-201ENST00000516254 102 ntBASIC0.78□□□□□ -2.28
ACTBP60709 RNU2-34P-201ENST00000516534 121 ntBASIC0.78□□□□□ -2.28
ACTBP60709 RNU6-1178P-201ENST00000516674 107 ntBASIC0.78□□□□□ -2.28
ACTBP60709 RNU6-567P-201ENST00000516746 107 ntBASIC0.78□□□□□ -2.28
ACTBP60709 SNORA25.17-201ENST00000517184 124 ntBASIC0.78□□□□□ -2.28
ACTBP60709 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.78□□□□□ -2.28
ACTBP60709 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.78□□□□□ -2.28
ACTBP60709 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.78□□□□□ -2.28
ACTBP60709 AP005136.1-201ENST00000579765 429 ntBASIC0.78□□□□□ -2.28
ACTBP60709 MIR4775-201ENST00000581168 75 ntBASIC0.78□□□□□ -2.28
ACTBP60709 MIR4452-201ENST00000583004 71 ntBASIC0.78□□□□□ -2.28
ACTBP60709 AL078603.1-201ENST00000603824 313 ntBASIC0.78□□□□□ -2.28
ACTBP60709 Z99289.3-201ENST00000605586 594 ntBASIC0.78□□□□□ -2.28
ACTBP60709 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.78□□□□□ -2.28
ACTBP60709 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
ACTBP60709 AC126177.8-201ENST00000618339 1015 ntBASIC0.78□□□□□ -2.28
ACTBP60709 MIR338-201ENST00000636369 67 ntBASIC0.78□□□□□ -2.28
ACTBP60709 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
ACTBP60709 SNORA4.2-201ENST00000365313 147 ntBASIC0.77□□□□□ -2.29
ACTBP60709 RNU6-74P-201ENST00000384235 107 ntBASIC0.77□□□□□ -2.29
ACTBP60709 Y_RNA.480-201ENST00000384364 102 ntBASIC0.77□□□□□ -2.29
ACTBP60709 MIR222-201ENST00000384992 110 ntBASIC0.77□□□□□ -2.29
ACTBP60709 MIR454-201ENST00000390180 115 ntBASIC0.77□□□□□ -2.29
ACTBP60709 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
ACTBP60709 PIGFP2-201ENST00000421400 651 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.77□□□□□ -2.29
ACTBP60709 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.77□□□□□ -2.29
ACTBP60709 HSFY7P-201ENST00000432672 318 ntBASIC0.77□□□□□ -2.29
ACTBP60709 HSFY8P-201ENST00000437934 318 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC073614.1-201ENST00000438690 650 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC073910.1-201ENST00000445047 438 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.77□□□□□ -2.29
ACTBP60709 MTND2P14-201ENST00000482139 351 ntBASIC0.77□□□□□ -2.29
ACTBP60709 RPS23P5-201ENST00000495419 428 ntBASIC0.77□□□□□ -2.29
ACTBP60709 TRBVA-201ENST00000498804 316 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC008628.2-201ENST00000502605 298 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC011406.1-201ENST00000512440 370 ntBASIC0.77□□□□□ -2.29
ACTBP60709 Y_RNA.673-201ENST00000516306 88 ntBASIC0.77□□□□□ -2.29
ACTBP60709 RNA5SP384-201ENST00000516615 116 ntBASIC0.77□□□□□ -2.29
ACTBP60709 Vault.3-201ENST00000516676 95 ntBASIC0.77□□□□□ -2.29
ACTBP60709 RNU6-410P-201ENST00000517006 107 ntBASIC0.77□□□□□ -2.29
ACTBP60709 RNA5SP503-201ENST00000517047 117 ntBASIC0.77□□□□□ -2.29
ACTBP60709 MTCO3P23-201ENST00000561363 289 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.77□□□□□ -2.29
ACTBP60709 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.77□□□□□ -2.29
ACTBP60709 AC091805.2-201ENST00000603848 235 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AP001836.1-201ENST00000604675 523 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AC064807.4-201ENST00000607201 407 ntBASIC0.77□□□□□ -2.29
ACTBP60709 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.77□□□□□ -2.29
ACTBP60709 AL136221.1-201ENST00000621449 509 ntBASIC0.77□□□□□ -2.29
ACTBP60709 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.77□□□□□ -2.29
ACTBP60709 AC027514.1-201ENST00000588561 1603 ntBASIC0.77□□□□□ -2.29
ACTBP60709 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ACTBP60709 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
ACTBP60709 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
ACTBP60709 RNU6-1123P-201ENST00000362347 106 ntBASIC0.76□□□□□ -2.29
ACTBP60709 RNU6-1287P-201ENST00000362914 107 ntBASIC0.76□□□□□ -2.29
ACTBP60709 RNU6-1080P-201ENST00000383982 107 ntBASIC0.76□□□□□ -2.29
ACTBP60709 RNU6-1026P-201ENST00000384465 108 ntBASIC0.76□□□□□ -2.29
ACTBP60709 RNU6-1060P-201ENST00000384664 107 ntBASIC0.76□□□□□ -2.29
ACTBP60709 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
ACTBP60709 AL596276.1-201ENST00000434465 418 ntBASIC0.76□□□□□ -2.29
ACTBP60709 USP9YP28-201ENST00000435142 589 ntBASIC0.76□□□□□ -2.29
ACTBP60709 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.76□□□□□ -2.29
ACTBP60709 AC079781.2-201ENST00000446424 169 ntBASIC0.76□□□□□ -2.29
ACTBP60709 AL162395.1-201ENST00000457882 422 ntBASIC0.76□□□□□ -2.29
ACTBP60709 AC079382.1-201ENST00000493346 557 ntBASIC0.76□□□□□ -2.29
ACTBP60709 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.76□□□□□ -2.29
ACTBP60709 FABP5P5-201ENST00000515537 406 ntBASIC0.76□□□□□ -2.29
ACTBP60709 DEFB131C-201ENST00000528817 165 ntBASIC0.76□□□□□ -2.29
ACTBP60709 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.76□□□□□ -2.29
ACTBP60709 AC090517.1-201ENST00000569307 266 ntBASIC0.76□□□□□ -2.29
ACTBP60709 TMF1P1-201ENST00000576058 373 ntBASIC0.76□□□□□ -2.29
ACTBP60709 AC136443.5-201ENST00000603741 370 ntBASIC0.76□□□□□ -2.29
ACTBP60709 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
ACTBP60709 AC040896.1-201ENST00000613819 479 ntBASIC0.76□□□□□ -2.29
ACTBP60709 BX322639.1-202ENST00000423987 2213 ntBASIC0.76□□□□□ -2.29
ACTBP60709 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
ACTBP60709 AC106754.1-201ENST00000562632 1513 ntBASIC0.75□□□□□ -2.29
ACTBP60709 RNU6-562P-201ENST00000362731 107 ntBASIC0.75□□□□□ -2.29
ACTBP60709 Y_RNA.122-201ENST00000363331 96 ntBASIC0.75□□□□□ -2.29
ACTBP60709 SNORA72.2-201ENST00000365028 127 ntBASIC0.75□□□□□ -2.29
ACTBP60709 SNORA18.2-201ENST00000383865 132 ntBASIC0.75□□□□□ -2.29
ACTBP60709 RNU6-877P-201ENST00000383868 107 ntBASIC0.75□□□□□ -2.29
ACTBP60709 SNORA36A-201ENST00000384221 132 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 372.1 ms