Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 RNU6-774P-201ENST00000363238 107 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 RNA5SP139-201ENST00000364340 117 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 RNU6-805P-201ENST00000365643 106 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 RNU6-142P-201ENST00000384019 107 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.418-201ENST00000384029 102 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 MIR147B-201ENST00000390185 80 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 RNA5SP293-201ENST00000410527 113 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 RPL19P1-201ENST00000411635 428 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC010095.1-201ENST00000443543 144 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC021205.2-201ENST00000480069 347 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AL049873.1-201ENST00000480540 376 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC016632.1-201ENST00000503994 196 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC107393.1-201ENST00000512403 346 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 MIR2276-201ENST00000516886 89 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 SNORD113-5-201ENST00000607261 78 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.81□□□□□ -1.8
CHMP4BP1P59074 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHMP4BP1P59074 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHMP4BP1P59074 AL049781.1-201ENST00000623195 3585 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 AC009487.2-201ENST00000420969 6821 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHMP4BP1P59074 MIR411-201ENST00000362239 96 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.44-201ENST00000362676 108 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.83-201ENST00000363005 113 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 RNU6-1027P-201ENST00000383998 107 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 AC009237.7-201ENST00000447357 229 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.644-201ENST00000459006 113 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 RAC1P5-201ENST00000512182 576 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 SNORA40.9-201ENST00000515895 93 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.674-201ENST00000516362 113 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 RNU6-579P-201ENST00000516879 102 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 AK6P2-201ENST00000549020 471 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.8□□□□□ -1.8
CHMP4BP1P59074 MIR5047-201ENST00000579212 100 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 AL137843.1-201ENST00000605078 385 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 AC002064.3-201ENST00000623448 346 ntBASIC3.8□□□□□ -1.8
CHMP4BP1P59074 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHMP4BP1P59074 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CHMP4BP1P59074 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHMP4BP1P59074 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 RNU6-47P-201ENST00000383866 107 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 U3.39-201ENST00000408569 239 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AL358075.3-201ENST00000426289 226 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 MRPS10P1-201ENST00000448483 130 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 RPS27P29-201ENST00000463110 252 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AC090525.1-201ENST00000479116 478 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 PHBP14-201ENST00000512887 367 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 RNU7-110P-201ENST00000516891 62 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 RNU6-255P-201ENST00000516957 105 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AC022559.1-201ENST00000520905 205 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AC026333.2-201ENST00000542164 106 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 RPL21P9-201ENST00000556149 474 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 YPEL5P2-201ENST00000605553 359 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 UCA1.1-201ENST00000620952 75 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CHMP4BP1P59074 Z83843.1-201ENST00000604070 3685 ntBASIC3.79□□□□□ -1.8
CHMP4BP1P59074 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.40-201ENST00000362645 93 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.122-201ENST00000363331 96 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.199-201ENST00000364014 102 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 RNU6-1175P-201ENST00000365200 107 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 RNY4P28-201ENST00000365281 93 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 RNU6-326P-201ENST00000365480 107 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 AC078809.1-201ENST00000427601 140 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 ARF4P2-201ENST00000430209 526 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.78□□□□□ -1.8
CHMP4BP1P59074 AL357552.1-201ENST00000445254 415 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 HMGN1P18-201ENST00000457642 277 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 SEPT14P8-201ENST00000508026 178 ntBASIC3.78□□□□□ -1.8
CHMP4BP1P59074 AC074198.2-201ENST00000508153 258 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms