Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC013412.1-201ENST00000610687 192 ntBASIC3.68□□□□□ -1.82
RTP1P59025 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.68□□□□□ -1.82
RTP1P59025 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.68□□□□□ -1.82
RTP1P59025 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTP1P59025 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RTP1P59025 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTP1P59025 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTP1P59025 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.67□□□□□ -1.82
RTP1P59025 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTP1P59025 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTP1P59025 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.67□□□□□ -1.82
RTP1P59025 Y_RNA.136-201ENST00000363444 102 ntBASIC3.67□□□□□ -1.82
RTP1P59025 Y_RNA.230-201ENST00000364348 109 ntBASIC3.67□□□□□ -1.82
RTP1P59025 Y_RNA.233-201ENST00000364407 101 ntBASIC3.67□□□□□ -1.82
RTP1P59025 RNU6-1141P-201ENST00000364520 107 ntBASIC3.67□□□□□ -1.82
RTP1P59025 RNU6-1289P-201ENST00000384431 106 ntBASIC3.67□□□□□ -1.82
RTP1P59025 MIR888-201ENST00000401186 77 ntBASIC3.67□□□□□ -1.82
RTP1P59025 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.67□□□□□ -1.82
RTP1P59025 SETP5-201ENST00000437270 562 ntBASIC3.67□□□□□ -1.82
RTP1P59025 snoU13.6-201ENST00000458785 104 ntBASIC3.67□□□□□ -1.82
RTP1P59025 RPS29P26-201ENST00000477483 171 ntBASIC3.67□□□□□ -1.82
RTP1P59025 AC016632.1-201ENST00000503994 196 ntBASIC3.67□□□□□ -1.82
RTP1P59025 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.67□□□□□ -1.82
RTP1P59025 AL138963.2-201ENST00000605137 226 ntBASIC3.67□□□□□ -1.82
RTP1P59025 AL357075.2-201ENST00000614906 189 ntBASIC3.67□□□□□ -1.82
RTP1P59025 MIR6715A-201ENST00000615929 79 ntBASIC3.67□□□□□ -1.82
RTP1P59025 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.67□□□□□ -1.82
RTP1P59025 U6.106-201ENST00000636360 105 ntBASIC3.67□□□□□ -1.82
RTP1P59025 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RTP1P59025 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.67□□□□□ -1.82
RTP1P59025 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RTP1P59025 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTP1P59025 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTP1P59025 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTP1P59025 RNU6-923P-201ENST00000364753 107 ntBASIC3.66□□□□□ -1.82
RTP1P59025 Y_RNA.291-201ENST00000364886 113 ntBASIC3.66□□□□□ -1.82
RTP1P59025 Y_RNA.383-201ENST00000383855 97 ntBASIC3.66□□□□□ -1.82
RTP1P59025 SNORA48.8-201ENST00000391324 134 ntBASIC3.66□□□□□ -1.82
RTP1P59025 RN7SKP61-201ENST00000410642 295 ntBASIC3.66□□□□□ -1.82
RTP1P59025 RPL19P1-201ENST00000411635 428 ntBASIC3.66□□□□□ -1.82
RTP1P59025 MTATP6P29-201ENST00000415057 132 ntBASIC3.66□□□□□ -1.82
RTP1P59025 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.66□□□□□ -1.82
RTP1P59025 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.66□□□□□ -1.82
RTP1P59025 AP000705.1-201ENST00000454567 350 ntBASIC3.66□□□□□ -1.82
RTP1P59025 SNORD2.1-201ENST00000458762 69 ntBASIC3.66□□□□□ -1.82
RTP1P59025 AL049830.2-201ENST00000480072 201 ntBASIC3.66□□□□□ -1.82
RTP1P59025 RPS27AP10-201ENST00000496103 208 ntBASIC3.66□□□□□ -1.82
RTP1P59025 RNY3P16-201ENST00000516338 101 ntBASIC3.66□□□□□ -1.82
RTP1P59025 MIR2276-201ENST00000516886 89 ntBASIC3.66□□□□□ -1.82
RTP1P59025 RNU6-1198P-201ENST00000516904 67 ntBASIC3.66□□□□□ -1.82
RTP1P59025 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTP1P59025 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.66□□□□□ -1.82
RTP1P59025 MIR3690-201ENST00000580266 75 ntBASIC3.66□□□□□ -1.82
RTP1P59025 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.66□□□□□ -1.82
RTP1P59025 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.66□□□□□ -1.82
RTP1P59025 AC006001.4-201ENST00000622243 395 ntBASIC3.66□□□□□ -1.82
RTP1P59025 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RTP1P59025 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTP1P59025 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RTP1P59025 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.66□□□□□ -1.82
RTP1P59025 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RTP1P59025 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.82
RTP1P59025 AL359854.1-201ENST00000614203 1594 ntBASIC3.65□□□□□ -1.82
RTP1P59025 MIR30E-201ENST00000362104 92 ntBASIC3.65□□□□□ -1.83
RTP1P59025 RNA5SP432-201ENST00000362480 116 ntBASIC3.65□□□□□ -1.83
RTP1P59025 Y_RNA.240-201ENST00000364469 95 ntBASIC3.65□□□□□ -1.83
RTP1P59025 RNU6-1280P-201ENST00000365211 107 ntBASIC3.65□□□□□ -1.83
RTP1P59025 Y_RNA.331-201ENST00000365267 102 ntBASIC3.65□□□□□ -1.83
RTP1P59025 RNY1P5-201ENST00000383890 115 ntBASIC3.65□□□□□ -1.83
RTP1P59025 NDUFS5P4-201ENST00000412983 318 ntBASIC3.65□□□□□ -1.83
RTP1P59025 POLR2KP2-201ENST00000438155 177 ntBASIC3.65□□□□□ -1.83
RTP1P59025 AC010095.1-201ENST00000443543 144 ntBASIC3.65□□□□□ -1.83
RTP1P59025 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.65□□□□□ -1.83
RTP1P59025 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.65□□□□□ -1.83
RTP1P59025 RPS29P20-201ENST00000489592 171 ntBASIC3.65□□□□□ -1.83
RTP1P59025 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.65□□□□□ -1.83
RTP1P59025 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.65□□□□□ -1.83
RTP1P59025 RNU7-200P-201ENST00000516105 62 ntBASIC3.65□□□□□ -1.83
RTP1P59025 RNU6-346P-201ENST00000516288 111 ntBASIC3.65□□□□□ -1.83
RTP1P59025 MRPS18CP4-201ENST00000535821 231 ntBASIC3.65□□□□□ -1.83
RTP1P59025 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
RTP1P59025 AC055872.1-201ENST00000570978 278 ntBASIC3.65□□□□□ -1.83
RTP1P59025 MIR3945-201ENST00000581853 98 ntBASIC3.65□□□□□ -1.83
RTP1P59025 AC018692.3-201ENST00000623929 123 ntBASIC3.65□□□□□ -1.83
RTP1P59025 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTP1P59025 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
RTP1P59025 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RTP1P59025 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.64□□□□□ -1.83
RTP1P59025 RNU1-70P-201ENST00000362618 164 ntBASIC3.64□□□□□ -1.83
RTP1P59025 RNU6-804P-201ENST00000384286 107 ntBASIC3.64□□□□□ -1.83
RTP1P59025 SNORA46.1-201ENST00000391069 153 ntBASIC3.64□□□□□ -1.83
RTP1P59025 RNA5SP229-201ENST00000410809 99 ntBASIC3.64□□□□□ -1.83
RTP1P59025 RPL23AP36-201ENST00000413895 458 ntBASIC3.64□□□□□ -1.83
RTP1P59025 AC138623.1-201ENST00000418060 216 ntBASIC3.64□□□□□ -1.83
RTP1P59025 AC009237.7-201ENST00000447357 229 ntBASIC3.64□□□□□ -1.83
RTP1P59025 UQCRBP2-201ENST00000447827 297 ntBASIC3.64□□□□□ -1.83
RTP1P59025 AC007395.1-201ENST00000451333 677 ntBASIC3.64□□□□□ -1.83
RTP1P59025 AP001324.2-201ENST00000461163 319 ntBASIC3.64□□□□□ -1.83
RTP1P59025 AC091021.1-201ENST00000468051 388 ntBASIC3.64□□□□□ -1.83
RTP1P59025 RPS4XP13-201ENST00000483219 789 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms