Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Z83843.1-201ENST00000604070 3685 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AC000403.1-201ENST00000613696 3585 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.93□□□□□ -1.94
CLRN1P58418 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
CLRN1P58418 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.93□□□□□ -1.94
CLRN1P58418 RNU6-1266P-201ENST00000362794 105 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 U3.9-201ENST00000363823 204 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 SNORA18.3-201ENST00000384122 132 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 RNU1-101P-201ENST00000391171 127 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AL033519.2-201ENST00000403958 392 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AC027124.2-201ENST00000428249 105 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 IFNA11P-201ENST00000446352 526 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 RNU6-625P-201ENST00000459412 107 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.93□□□□□ -1.94
CLRN1P58418 MRPS36P2-201ENST00000512569 299 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AC074133.1-201ENST00000515696 183 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 SCARNA17.1-201ENST00000516211 143 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 SCARNA17.2-201ENST00000516334 143 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AC018448.1-201ENST00000552843 316 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.93□□□□□ -1.94
CLRN1P58418 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.93□□□□□ -1.94
CLRN1P58418 AC055872.1-201ENST00000570978 278 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 MIR3158-1-201ENST00000583596 81 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.93□□□□□ -1.94
CLRN1P58418 SCARNA17.4-201ENST00000614296 143 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 AC006133.1-201ENST00000617106 264 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.93□□□□□ -1.94
CLRN1P58418 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.93□□□□□ -1.94
CLRN1P58418 AC135776.4-201ENST00000624300 1904 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLRN1P58418 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CLRN1P58418 AC069528.2-201ENST00000624849 1991 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.92□□□□□ -1.94
CLRN1P58418 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLRN1P58418 RNU1-62P-201ENST00000362599 164 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 Y_RNA.65-201ENST00000362846 100 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 CD24P4-201ENST00000382840 243 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 Y_RNA.498-201ENST00000384460 102 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 SNORA46.1-201ENST00000391069 153 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 SNORA53-201ENST00000391141 249 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 ELOCP21-201ENST00000412558 336 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.92□□□□□ -1.94
CLRN1P58418 AL390729.2-201ENST00000416137 156 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.92□□□□□ -1.94
CLRN1P58418 EIF4EP4-201ENST00000424916 578 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.92□□□□□ -1.94
CLRN1P58418 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.92□□□□□ -1.94
CLRN1P58418 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.92□□□□□ -1.94
CLRN1P58418 SNORA64.4-201ENST00000516632 81 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.92□□□□□ -1.94
CLRN1P58418 MIR4765-201ENST00000585007 77 ntBASIC2.92□□□□□ -1.94
CLRN1P58418 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.92□□□□□ -1.94
CLRN1P58418 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.92□□□□□ -1.94
CLRN1P58418 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLRN1P58418 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CLRN1P58418 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CLRN1P58418 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
CLRN1P58418 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.91□□□□□ -1.94
CLRN1P58418 RNU1-70P-201ENST00000362618 164 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 Y_RNA.331-201ENST00000365267 102 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 Y_RNA.569-201ENST00000384749 103 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 MIR490-201ENST00000384865 128 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CLRN1P58418 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.91□□□□□ -1.94
CLRN1P58418 AC004866.1-201ENST00000411748 78 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 AC009310.1-201ENST00000414414 451 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 AC004386.2-201ENST00000441858 148 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 AC115115.1-201ENST00000449927 248 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 RPL23AP3-201ENST00000453844 468 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.91□□□□□ -1.94
CLRN1P58418 RN7SL442P-201ENST00000473804 320 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 RN7SL293P-201ENST00000481765 281 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 RAC1P5-201ENST00000512182 576 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 RNU2-31P-201ENST00000516954 155 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 DEFB131C-201ENST00000528817 165 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 AC026470.2-201ENST00000561492 181 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.91□□□□□ -1.94
CLRN1P58418 AC011471.1-201ENST00000585766 187 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 AC008749.1-201ENST00000597650 306 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 BX284668.6-201ENST00000606899 438 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 U2.14-201ENST00000615943 113 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 AC005562.2-201ENST00000618264 111 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.91□□□□□ -1.94
CLRN1P58418 AC006001.4-201ENST00000622243 395 ntBASIC2.91□□□□□ -1.94
CLRN1P58418 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLRN1P58418 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLRN1P58418 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.91□□□□□ -1.94
CLRN1P58418 AC026241.1-201ENST00000517873 2142 ntBASIC2.9□□□□□ -1.94
CLRN1P58418 RNA5SP383-201ENST00000362934 120 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 RNU6-326P-201ENST00000365480 107 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 SNORA18.2-201ENST00000383865 132 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 MIR449B-201ENST00000384995 97 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 SNORA12-201ENST00000391162 147 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 RNU2-14P-201ENST00000411053 191 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.9□□□□□ -1.95
CLRN1P58418 RPL32P35-201ENST00000415214 394 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.9□□□□□ -1.95
CLRN1P58418 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLRN1P58418 RAB28P5-201ENST00000427490 651 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms