Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC073910.1-201ENST00000445047 438 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AC022364.2-201ENST00000457963 554 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.1□□□□□ -2.23
CLDN18P56856 AC091874.1-201ENST00000511402 339 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 SNORD27.1-201ENST00000516319 72 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.1□□□□□ -2.23
CLDN18P56856 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.1□□□□□ -2.23
CLDN18P56856 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.1□□□□□ -2.23
CLDN18P56856 MIR4703-201ENST00000577728 79 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AC245884.10-201ENST00000597355 337 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AP001836.1-201ENST00000604675 523 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AC064807.4-201ENST00000607201 407 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AP001506.1-201ENST00000615444 211 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AL136221.1-201ENST00000621449 509 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RNU1-76P-201ENST00000362903 159 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 RNU4-48P-201ENST00000365559 182 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 HMGN1P14-201ENST00000412459 517 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 EIF1P1-201ENST00000421436 341 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 AC012306.1-201ENST00000423267 114 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 RNU7-125P-201ENST00000458760 62 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 SCARNA18-201ENST00000459004 134 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 MTCO2P6-201ENST00000463134 685 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 RAB11AP2-201ENST00000545905 639 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 MIR4753-201ENST00000585119 83 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 AC234772.3-201ENST00000602277 528 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 AC008147.4-201ENST00000617570 1204 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 AC126177.8-201ENST00000618339 1015 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.09□□□□□ -2.23
CLDN18P56856 AF246928.1-201ENST00000623768 87 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 AC099654.5-201ENST00000636479 350 ntBASIC1.09□□□□□ -2.23
CLDN18P56856 RNU6-266P-201ENST00000364225 107 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 SNORA63D-201ENST00000364359 132 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 SNORA18.2-201ENST00000383865 132 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 SNORA16.2-201ENST00000390991 127 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.08□□□□□ -2.24
CLDN18P56856 AC015922.2-201ENST00000435593 184 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC009961.2-201ENST00000435771 251 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN18P56856 HSPE1P13-201ENST00000451143 297 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC007547.1-201ENST00000462177 490 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.08□□□□□ -2.24
CLDN18P56856 SNORA25.17-201ENST00000517184 124 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN18P56856 MIR4709-201ENST00000577272 72 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AP003465.2-201ENST00000602571 373 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC245014.2-201ENST00000603689 287 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AC246785.4-201ENST00000605374 287 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLDN18P56856 AC091812.1-201ENST00000432235 1948 ntBASIC1.08□□□□□ -2.24
CLDN18P56856 AL031577.2-201ENST00000404133 280 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN18P56856 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 RNU7-34P-201ENST00000459394 64 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.07□□□□□ -2.24
CLDN18P56856 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDN18P56856 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 AC011406.1-201ENST00000512440 370 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 RNA5SP384-201ENST00000516615 116 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 AP003072.2-201ENST00000527756 676 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 BNIP3P39-201ENST00000601077 554 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN18P56856 AC011458.1-201ENST00000604034 617 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 RNU6-85P-201ENST00000605989 107 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 AC009994.1-201ENST00000606889 253 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 AC027449.1-201ENST00000608890 407 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 AL603839.4-201ENST00000624658 1005 ntBASIC1.07□□□□□ -2.24
CLDN18P56856 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLDN18P56856 RNU4-91P-201ENST00000364778 135 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 RNA5SP259-201ENST00000365541 109 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 RNU6-1127P-201ENST00000384580 107 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 MIR300-201ENST00000401138 83 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 MTND3P17-201ENST00000416968 344 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 BX295541.1-201ENST00000417774 250 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AC060773.1-201ENST00000421698 310 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN18P56856 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.06□□□□□ -2.24
CLDN18P56856 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.06□□□□□ -2.24
CLDN18P56856 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.06□□□□□ -2.24
CLDN18P56856 AL121601.2-201ENST00000438019 707 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN18P56856 AC244505.5-201ENST00000443639 207 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 PGBD4P5-201ENST00000445958 426 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN18P56856 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 RN7SKP88-201ENST00000516847 250 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 RNU6-856P-201ENST00000516959 98 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 RNU6-232P-201ENST00000517144 64 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN18P56856 AL365434.2-201ENST00000607979 234 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 7SK.8-201ENST00000612110 250 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AC040896.1-201ENST00000613819 479 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CLDN18P56856 7SK.11-201ENST00000615477 250 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms