Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AL606517.2-201ENST00000442855 241 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.23□□□□□ -2.37
FOXA3P55318 AC016717.1-201ENST00000448918 286 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AL133217.1-201ENST00000450980 425 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 RNA5SP337-201ENST00000517007 109 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 RNU6-1003P-201ENST00000517099 105 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 RNU6-201P-201ENST00000517100 61 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC022616.6-201ENST00000520479 119 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 MIR4452-201ENST00000583004 71 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC008521.1-201ENST00000587471 187 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC080078.2-201ENST00000603766 501 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC080013.3-201ENST00000606839 578 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC097478.2-201ENST00000610572 514 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.23□□□□□ -2.37
FOXA3P55318 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC009509.4-201ENST00000619202 509 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AL603839.4-201ENST00000624658 1005 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 Z69720.2-201ENST00000624755 279 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.23□□□□□ -2.37
FOXA3P55318 MIR5087-201ENST00000635826 76 ntBASIC0.23□□□□□ -2.37
FOXA3P55318 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.23□□□□□ -2.37
FOXA3P55318 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.23□□□□□ -2.37
FOXA3P55318 RNY4P24-201ENST00000362735 96 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 RNU1-76P-201ENST00000362903 159 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 RNU6-336P-201ENST00000364891 107 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 RNU6-1335P-201ENST00000365426 107 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 SNORA36A-201ENST00000384221 132 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 RNU6-417P-201ENST00000384712 107 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 RNU6-1031P-201ENST00000384773 107 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 RNA5SP467-201ENST00000391274 118 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AL355796.1-201ENST00000406706 323 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AC007283.2-201ENST00000424739 197 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 TIMM9P3-201ENST00000428659 274 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 MTND1P32-201ENST00000433043 938 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 EEF1A1P39-201ENST00000440791 250 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 MTND3P1-201ENST00000441336 220 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.22□□□□□ -2.37
FOXA3P55318 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.22□□□□□ -2.37
FOXA3P55318 Y_RNA.638-201ENST00000459374 113 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AC007547.1-201ENST00000462177 490 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.22□□□□□ -2.37
FOXA3P55318 AC113410.1-201ENST00000505029 247 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AC067942.3-201ENST00000512025 362 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.22□□□□□ -2.37
FOXA3P55318 SNORA31.10-201ENST00000516482 106 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.22□□□□□ -2.37
FOXA3P55318 AC007834.2-201ENST00000536310 343 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.22□□□□□ -2.37
FOXA3P55318 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.22□□□□□ -2.37
FOXA3P55318 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.22□□□□□ -2.37
FOXA3P55318 TMF1P1-201ENST00000576058 373 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 MIR5000-201ENST00000577717 103 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AL158042.1-201ENST00000605338 460 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 AC012557.2-201ENST00000605919 418 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 GHRLOS.1-201ENST00000610995 70 ntBASIC0.22□□□□□ -2.37
FOXA3P55318 snoU2-30.2-201ENST00000362805 70 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RNU6-552P-201ENST00000362869 119 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 SNORD32A-201ENST00000364805 84 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RNU6-505P-201ENST00000384427 107 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RNU6-809P-201ENST00000384461 107 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 Y_RNA.504-201ENST00000384481 104 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RNU6-1235P-201ENST00000384559 107 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RNA5SP323-201ENST00000391094 133 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 MIR208B-201ENST00000401172 77 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RNU6-607P-201ENST00000411283 108 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.21□□□□□ -2.38
FOXA3P55318 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.21□□□□□ -2.38
FOXA3P55318 AC078809.1-201ENST00000427601 140 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.21□□□□□ -2.38
FOXA3P55318 HSFY7P-201ENST00000432672 318 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 HMGN2P34-201ENST00000437647 269 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 HSFY8P-201ENST00000437934 318 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RPEP5-201ENST00000441137 268 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 MTND1P12-201ENST00000455231 147 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 RNU6-498P-201ENST00000459468 107 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.21□□□□□ -2.38
FOXA3P55318 RNU6-1069P-201ENST00000516612 133 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.21□□□□□ -2.38
FOXA3P55318 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.21□□□□□ -2.38
FOXA3P55318 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.21□□□□□ -2.38
FOXA3P55318 AC013244.3-201ENST00000605614 388 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 AL021368.1-201ENST00000607490 540 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
FOXA3P55318 AC116165.2-201ENST00000616705 206 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 AP000484.1-201ENST00000620067 1252 ntBASIC0.21□□□□□ -2.38
FOXA3P55318 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.21□□□□□ -2.38
FOXA3P55318 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
FOXA3P55318 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
FOXA3P55318 U3.4-201ENST00000363352 213 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 Y_RNA.324-201ENST00000365165 102 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 RNU6-641P-201ENST00000384006 107 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 RNU6-1237P-201ENST00000384777 107 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 RNU2-39P-201ENST00000410604 198 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 RNU2-72P-201ENST00000411175 163 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.2□□□□□ -2.38
FOXA3P55318 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.2□□□□□ -2.38
FOXA3P55318 TAF9P1-201ENST00000445421 515 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AL606662.1-201ENST00000445763 553 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms