Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HMGCS2P54868 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 SNORD116-11-201ENST00000383882 92 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 RNU6-43P-201ENST00000384302 107 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 RNU1-148P-201ENST00000384472 162 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 RNU6-1222P-201ENST00000384615 107 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HMGCS2P54868 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCS2P54868 AL030996.1-201ENST00000411430 235 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCS2P54868 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCS2P54868 AC138393.2-201ENST00000414742 246 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCS2P54868 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGCS2P54868 AC012308.1-201ENST00000451232 178 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCS2P54868 RNU7-187P-201ENST00000458985 68 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCS2P54868 AL121594.1-201ENST00000475906 575 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AC116353.2-201ENST00000505332 712 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 TRMT112P2-201ENST00000512910 132 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AC025465.4-201ENST00000513422 638 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGCS2P54868 RNU2-53P-201ENST00000516257 147 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCS2P54868 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGCS2P54868 CBX3P4-201ENST00000538909 354 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.95□□□□□ -2.1
HMGCS2P54868 MIR4742-201ENST00000581069 85 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 MIR4801-201ENST00000582704 82 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AC007229.1-201ENST00000590455 412 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AP001836.1-201ENST00000604675 523 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 AL355297.2-201ENST00000604792 129 ntBASIC1.95□□□□□ -2.1
HMGCS2P54868 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
HMGCS2P54868 MIR337-201ENST00000362281 93 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 Y_RNA.72-201ENST00000362894 103 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 Y_RNA.160-201ENST00000363677 92 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 RNU6-1317P-201ENST00000364582 104 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 Y_RNA.303-201ENST00000364998 94 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 RNU6-325P-201ENST00000411132 105 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AP000275.1-201ENST00000411943 390 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 RPL23AP95-201ENST00000426806 265 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS2P54868 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS2P54868 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGCS2P54868 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGCS2P54868 RPL9P9-202ENST00000466501 579 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 RPL31P58-201ENST00000469001 379 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 PRDX4P1-201ENST00000507189 574 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AC096745.1-201ENST00000509945 370 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS2P54868 AC091135.1-201ENST00000585943 307 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AL713866.2-201ENST00000603579 219 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AL645939.4-201ENST00000604495 135 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AL450472.1-202ENST00000637286 180 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AP000553.5-201ENST00000641933 54 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HMGCS2P54868 AC006026.1-201ENST00000444025 1803 ntBASIC1.94□□□□□ -2.1
HMGCS2P54868 AC009487.4-201ENST00000624969 3585 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RNU6-562P-201ENST00000362731 107 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGCS2P54868 RNU6-510P-201ENST00000391239 108 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RNU6-876P-201ENST00000391295 104 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 MTND3P8-201ENST00000412909 339 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGCS2P54868 RPS15AP10-201ENST00000432472 382 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AC009238.1-201ENST00000442165 424 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 GPM6BP3-201ENST00000442797 145 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGCS2P54868 AC009237.6-201ENST00000446969 424 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS2P54868 AL353752.1-201ENST00000454946 260 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RPL30P1-201ENST00000488676 339 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AC140059.1-201ENST00000489238 361 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 PTP4A1P4-201ENST00000512479 322 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RNU5F-2P-201ENST00000516066 82 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 SNORA20.3-201ENST00000516880 132 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RNU6-612P-201ENST00000516909 102 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RNU6-273P-201ENST00000516937 96 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RNA5SP454-201ENST00000517231 127 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS2P54868 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS2P54868 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS2P54868 AC104581.2-201ENST00000572227 430 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 MIR4529-201ENST00000578110 78 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AC011712.1-201ENST00000588959 234 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RPL30P11-203ENST00000598995 310 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 RBM11P1-201ENST00000604951 799 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AL512598.1-201ENST00000610158 273 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGCS2P54868 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 AC007792.1-201ENST00000623023 402 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 SNORA43.4-201ENST00000629559 138 ntBASIC1.93□□□□□ -2.1
HMGCS2P54868 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMGCS2P54868 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGCS2P54868 RNU6-212P-201ENST00000362642 104 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 RNU6-655P-201ENST00000362858 107 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 Y_RNA.151-201ENST00000363566 112 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 RNU6-1141P-201ENST00000364520 107 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms