Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PRELID3BP1-201ENST00000457142 540 ntBASIC3.03□□□□□ -1.92
CACNA2D1P54289 RNU6-182P-201ENST00000516970 105 ntBASIC3.03□□□□□ -1.92
CACNA2D1P54289 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
CACNA2D1P54289 AP000867.2-201ENST00000532468 320 ntBASIC3.03□□□□□ -1.92
CACNA2D1P54289 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA2D1P54289 AL359198.2-201ENST00000611836 194 ntBASIC3.03□□□□□ -1.92
CACNA2D1P54289 AL138880.2-201ENST00000616214 239 ntBASIC3.03□□□□□ -1.92
CACNA2D1P54289 SCARNA4-201ENST00000629045 128 ntBASIC3.03□□□□□ -1.92
CACNA2D1P54289 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CACNA2D1P54289 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
CACNA2D1P54289 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CACNA2D1P54289 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 AC096644.4-201ENST00000563417 2912 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 RNU6-1266P-201ENST00000362794 105 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 SNORD81.1-201ENST00000363064 77 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 RNU6-778P-201ENST00000363269 103 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 SNORD113-8-201ENST00000363497 74 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 Y_RNA.269-201ENST00000364685 89 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 Y_RNA.352-201ENST00000365439 102 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 RNU6-17P-201ENST00000384245 107 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 RNU6-18P-201ENST00000384527 107 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 SNORD116-20-201ENST00000384529 92 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 MIR32-201ENST00000384965 70 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 SNORD78.2-201ENST00000391076 69 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 SNORD88.1-201ENST00000408684 91 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 AF186996.7-201ENST00000492781 209 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 SNORA31.6-201ENST00000516241 130 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 RNU5B-3P-201ENST00000516601 115 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 SNORA81.3-201ENST00000517283 198 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 RPL23AP88-201ENST00000605759 454 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 MIR7106-201ENST00000612419 65 ntBASIC3.02□□□□□ -1.93
CACNA2D1P54289 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CACNA2D1P54289 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CACNA2D1P54289 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA2D1P54289 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA2D1P54289 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNU6-884P-201ENST00000363889 107 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNU6-280P-201ENST00000364145 104 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 SNORA14A-201ENST00000364773 135 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 Y_RNA.297-201ENST00000364950 91 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNU6-1286P-201ENST00000383871 107 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNU1-73P-201ENST00000383971 164 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNU6-318P-201ENST00000384283 103 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 Y_RNA.785-201ENST00000384290 109 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 Y_RNA.581-201ENST00000391017 97 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 AC016700.2-201ENST00000446011 156 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 MTATP6P7-201ENST00000453315 681 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNU6-1282P-201ENST00000516735 96 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 RNU6-928P-201ENST00000516876 104 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 MIR4643-201ENST00000577473 78 ntBASIC3.01□□□□□ -1.93
CACNA2D1P54289 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CACNA2D1P54289 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA2D1P54289 MAPK10-266ENST00000641066 6555 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3□□□□□ -1.93
CACNA2D1P54289 AC103988.1-201ENST00000566382 2177 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 SNORD56.1-201ENST00000362913 68 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 Y_RNA.150-201ENST00000363562 102 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 RNU6-879P-201ENST00000364328 108 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 RNU6-843P-201ENST00000384454 104 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 RNU6-851P-201ENST00000384565 107 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 HMGN2P30-201ENST00000423237 256 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3□□□□□ -1.93
CACNA2D1P54289 AC010099.1-201ENST00000455434 375 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 snoU13.28-201ENST00000459235 104 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 AC087477.1-201ENST00000465747 340 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 SNRPGP7-201ENST00000469016 106 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 AP000870.1-201ENST00000472927 406 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3□□□□□ -1.93
CACNA2D1P54289 RNA5SP367-201ENST00000516557 118 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 IGHVII-62-1-201ENST00000519283 235 ntBASIC3□□□□□ -1.93
CACNA2D1P54289 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3□□□□□ -1.93
CACNA2D1P54289 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3□□□□□ -1.93
CACNA2D1P54289 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CACNA2D1P54289 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CACNA2D1P54289 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CACNA2D1P54289 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA2D1P54289 RNA5SP361-201ENST00000362686 118 ntBASIC2.99□□□□□ -1.93
CACNA2D1P54289 RNU1-35P-201ENST00000362782 153 ntBASIC2.99□□□□□ -1.93
CACNA2D1P54289 CD24P4-201ENST00000382840 243 ntBASIC2.99□□□□□ -1.93
CACNA2D1P54289 SNORA29-201ENST00000384183 140 ntBASIC2.99□□□□□ -1.93
CACNA2D1P54289 MIR487A-201ENST00000385009 80 ntBASIC2.99□□□□□ -1.93
CACNA2D1P54289 SNORD58.1-201ENST00000391313 66 ntBASIC2.99□□□□□ -1.93
CACNA2D1P54289 AL590004.2-201ENST00000404787 371 ntBASIC2.99□□□□□ -1.93
CACNA2D1P54289 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms