Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.47□□□□□ -1.85
MRE11P49959 AC091564.4-201ENST00000533934 2194 ntBASIC3.47□□□□□ -1.85
MRE11P49959 RNU6-968P-201ENST00000384076 107 ntBASIC3.47□□□□□ -1.85
MRE11P49959 Y_RNA.439-201ENST00000384119 94 ntBASIC3.47□□□□□ -1.85
MRE11P49959 Y_RNA.515-201ENST00000384535 112 ntBASIC3.47□□□□□ -1.85
MRE11P49959 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
MRE11P49959 SNORD115-46-201ENST00000390982 71 ntBASIC3.47□□□□□ -1.85
MRE11P49959 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.47□□□□□ -1.85
MRE11P49959 AL591043.1-201ENST00000432461 424 ntBASIC3.47□□□□□ -1.85
MRE11P49959 AC243964.1-201ENST00000441814 261 ntBASIC3.47□□□□□ -1.85
MRE11P49959 AL031659.1-201ENST00000447075 539 ntBASIC3.47□□□□□ -1.85
MRE11P49959 RPL37P4-201ENST00000448908 268 ntBASIC3.47□□□□□ -1.85
MRE11P49959 snoU13.23-201ENST00000458863 104 ntBASIC3.47□□□□□ -1.85
MRE11P49959 RPL23AP75-201ENST00000491601 451 ntBASIC3.47□□□□□ -1.85
MRE11P49959 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.47□□□□□ -1.85
MRE11P49959 HMGB1P35-201ENST00000503360 598 ntBASIC3.47□□□□□ -1.85
MRE11P49959 Y_RNA.713-201ENST00000517013 96 ntBASIC3.47□□□□□ -1.85
MRE11P49959 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.47□□□□□ -1.85
MRE11P49959 AC093023.1-201ENST00000547375 507 ntBASIC3.47□□□□□ -1.85
MRE11P49959 AC136932.1-201ENST00000574771 208 ntBASIC3.47□□□□□ -1.85
MRE11P49959 AC020895.1-201ENST00000595362 272 ntBASIC3.47□□□□□ -1.85
MRE11P49959 RPL23AP88-201ENST00000605759 454 ntBASIC3.47□□□□□ -1.85
MRE11P49959 MIR6134-201ENST00000617606 109 ntBASIC3.47□□□□□ -1.85
MRE11P49959 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.47□□□□□ -1.85
MRE11P49959 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
MRE11P49959 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MRE11P49959 AC080128.1-201ENST00000474389 1917 ntBASIC3.46□□□□□ -1.85
MRE11P49959 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MRE11P49959 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.46□□□□□ -1.86
MRE11P49959 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
MRE11P49959 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MRE11P49959 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
MRE11P49959 snoU2_19.2-201ENST00000363024 80 ntBASIC3.46□□□□□ -1.86
MRE11P49959 RNU6-884P-201ENST00000363889 107 ntBASIC3.46□□□□□ -1.86
MRE11P49959 Y_RNA.416-201ENST00000384014 113 ntBASIC3.46□□□□□ -1.86
MRE11P49959 MIR888-201ENST00000401186 77 ntBASIC3.46□□□□□ -1.86
MRE11P49959 AC096920.1-201ENST00000423991 241 ntBASIC3.46□□□□□ -1.86
MRE11P49959 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.46□□□□□ -1.86
MRE11P49959 AC009296.1-201ENST00000443146 155 ntBASIC3.46□□□□□ -1.86
MRE11P49959 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.46□□□□□ -1.86
MRE11P49959 RPL30P1-201ENST00000488676 339 ntBASIC3.46□□□□□ -1.86
MRE11P49959 HMGB3P17-201ENST00000504195 649 ntBASIC3.46□□□□□ -1.86
MRE11P49959 AC091826.1-201ENST00000514065 313 ntBASIC3.46□□□□□ -1.86
MRE11P49959 RNU6-111P-201ENST00000517179 105 ntBASIC3.46□□□□□ -1.86
MRE11P49959 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.46□□□□□ -1.86
MRE11P49959 AC107016.2-201ENST00000547968 190 ntBASIC3.46□□□□□ -1.86
MRE11P49959 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.46□□□□□ -1.86
MRE11P49959 MIR4300-201ENST00000581016 96 ntBASIC3.46□□□□□ -1.86
MRE11P49959 MIR376A1-201ENST00000616574 68 ntBASIC3.46□□□□□ -1.86
MRE11P49959 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MRE11P49959 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.46□□□□□ -1.86
MRE11P49959 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.46□□□□□ -1.86
MRE11P49959 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MRE11P49959 RNU6-222P-201ENST00000362438 107 ntBASIC3.45□□□□□ -1.86
MRE11P49959 Y_RNA.20-201ENST00000362479 113 ntBASIC3.45□□□□□ -1.86
MRE11P49959 Y_RNA.237-201ENST00000364439 102 ntBASIC3.45□□□□□ -1.86
MRE11P49959 RNU6-1286P-201ENST00000383871 107 ntBASIC3.45□□□□□ -1.86
MRE11P49959 RNU6-17P-201ENST00000384245 107 ntBASIC3.45□□□□□ -1.86
MRE11P49959 RNU6-18P-201ENST00000384527 107 ntBASIC3.45□□□□□ -1.86
MRE11P49959 MIR548H3-201ENST00000408771 118 ntBASIC3.45□□□□□ -1.86
MRE11P49959 AC004383.1-201ENST00000438135 289 ntBASIC3.45□□□□□ -1.86
MRE11P49959 AL353705.4-201ENST00000449661 238 ntBASIC3.45□□□□□ -1.86
MRE11P49959 AC091874.1-201ENST00000511402 339 ntBASIC3.45□□□□□ -1.86
MRE11P49959 RNU6-991P-201ENST00000516168 107 ntBASIC3.45□□□□□ -1.86
MRE11P49959 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.45□□□□□ -1.86
MRE11P49959 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.45□□□□□ -1.86
MRE11P49959 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
MRE11P49959 AP003122.5-201ENST00000527668 3766 ntBASIC3.45□□□□□ -1.86
MRE11P49959 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
MRE11P49959 LINC02555-201ENST00000563933 1951 ntBASIC3.45□□□□□ -1.86
MRE11P49959 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
MRE11P49959 MIR335-201ENST00000362173 94 ntBASIC3.44□□□□□ -1.86
MRE11P49959 Y_RNA.118-201ENST00000363300 101 ntBASIC3.44□□□□□ -1.86
MRE11P49959 Y_RNA.143-201ENST00000363520 106 ntBASIC3.44□□□□□ -1.86
MRE11P49959 RNU1-100P-201ENST00000365255 165 ntBASIC3.44□□□□□ -1.86
MRE11P49959 SNORD116-20-201ENST00000384529 92 ntBASIC3.44□□□□□ -1.86
MRE11P49959 RNU4-70P-201ENST00000384579 139 ntBASIC3.44□□□□□ -1.86
MRE11P49959 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.44□□□□□ -1.86
MRE11P49959 AL590135.1-201ENST00000422215 156 ntBASIC3.44□□□□□ -1.86
MRE11P49959 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.44□□□□□ -1.86
MRE11P49959 AF186996.7-201ENST00000492781 209 ntBASIC3.44□□□□□ -1.86
MRE11P49959 RNU6-1012P-201ENST00000516606 109 ntBASIC3.44□□□□□ -1.86
MRE11P49959 RN7SKP272-201ENST00000516988 232 ntBASIC3.44□□□□□ -1.86
MRE11P49959 RNU6-548P-201ENST00000517083 115 ntBASIC3.44□□□□□ -1.86
MRE11P49959 AC004486.1-201ENST00000546846 233 ntBASIC3.44□□□□□ -1.86
MRE11P49959 MIR3609-201ENST00000582661 80 ntBASIC3.44□□□□□ -1.86
MRE11P49959 Y_RNA.772-201ENST00000606692 102 ntBASIC3.44□□□□□ -1.86
MRE11P49959 AC240442.1-201ENST00000616055 283 ntBASIC3.44□□□□□ -1.86
MRE11P49959 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.44□□□□□ -1.86
MRE11P49959 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MRE11P49959 AC099654.7-201ENST00000635788 2127 ntBASIC3.44□□□□□ -1.86
MRE11P49959 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MRE11P49959 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
MRE11P49959 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.43□□□□□ -1.86
MRE11P49959 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MRE11P49959 AL391987.6-201ENST00000305671 199 ntBASIC3.43□□□□□ -1.86
MRE11P49959 RNU6-1301P-201ENST00000362724 104 ntBASIC3.43□□□□□ -1.86
MRE11P49959 Y_RNA.164-201ENST00000363709 102 ntBASIC3.43□□□□□ -1.86
MRE11P49959 SNORD27-201ENST00000363981 72 ntBASIC3.43□□□□□ -1.86
MRE11P49959 SNORD115-32-201ENST00000364079 82 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms