Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 U3.45-201ENST00000607547 219 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.13□□□□□ -1.59
PRIM1P49642 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRIM1P49642 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRIM1P49642 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRIM1P49642 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.13□□□□□ -1.59
PRIM1P49642 ZNF962P-201ENST00000443465 3140 ntBASIC5.12□□□□□ -1.59
PRIM1P49642 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRIM1P49642 RNU7-115P-201ENST00000516433 55 ntBASIC5.12□□□□□ -1.59
PRIM1P49642 RNU6-844P-201ENST00000517175 102 ntBASIC5.12□□□□□ -1.59
PRIM1P49642 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.12□□□□□ -1.59
PRIM1P49642 AL160236.1-201ENST00000556317 195 ntBASIC5.12□□□□□ -1.59
PRIM1P49642 AC133485.4-201ENST00000561835 220 ntBASIC5.12□□□□□ -1.59
PRIM1P49642 AC138907.4-201ENST00000570107 226 ntBASIC5.12□□□□□ -1.59
PRIM1P49642 AC244505.7-201ENST00000599675 272 ntBASIC5.12□□□□□ -1.59
PRIM1P49642 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRIM1P49642 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRIM1P49642 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.12□□□□□ -1.59
PRIM1P49642 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRIM1P49642 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.12□□□□□ -1.59
PRIM1P49642 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.11□□□□□ -1.59
PRIM1P49642 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRIM1P49642 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.11□□□□□ -1.59
PRIM1P49642 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.11□□□□□ -1.59
PRIM1P49642 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PRIM1P49642 RNU6-235P-201ENST00000362644 107 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 Y_RNA.525-201ENST00000384570 113 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 MIR218-2-201ENST00000385006 110 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 AL512604.1-201ENST00000404812 257 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 MIR1302-4-201ENST00000408701 150 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 SNORA36B-201ENST00000410438 131 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 AIMP1P2-201ENST00000425294 312 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 RPS4XP2-201ENST00000458402 793 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 RNU7-116P-201ENST00000516940 62 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 MIR5195-201ENST00000583555 115 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 AC087190.4-201ENST00000574616 8334 ntBASIC5.11□□□□□ -1.59
PRIM1P49642 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRIM1P49642 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRIM1P49642 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRIM1P49642 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.11□□□□□ -1.59
PRIM1P49642 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRIM1P49642 SNORD45.3-201ENST00000363836 72 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 RNA5SP189-201ENST00000364920 115 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 RNU6-1080P-201ENST00000383982 107 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 SNORD116-21-201ENST00000384507 92 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 MIR548A3-201ENST00000385297 97 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 VDAC1P3-201ENST00000434069 851 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.1□□□□□ -1.59
PRIM1P49642 Y_RNA.651-201ENST00000459380 103 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 RPL36AP21-201ENST00000490372 323 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 AC093331.1-201ENST00000521474 169 ntBASIC5.1□□□□□ -1.59
PRIM1P49642 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.1□□□□□ -1.59
PRIM1P49642 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.1□□□□□ -1.59
PRIM1P49642 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRIM1P49642 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC5.1□□□□□ -1.59
PRIM1P49642 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.1□□□□□ -1.59
PRIM1P49642 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.1□□□□□ -1.59
PRIM1P49642 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRIM1P49642 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.09□□□□□ -1.59
PRIM1P49642 Y_RNA.280-201ENST00000364765 112 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 SNORA40.5-201ENST00000391061 128 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 RNA5SP504-201ENST00000410676 117 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 AC078817.1-201ENST00000492623 435 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 RNU2-44P-201ENST00000516795 194 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 AC120024.3-201ENST00000603167 156 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 AC073308.1-201ENST00000623696 305 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.09□□□□□ -1.59
PRIM1P49642 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRIM1P49642 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRIM1P49642 AC026241.1-201ENST00000517873 2142 ntBASIC5.09□□□□□ -1.59
PRIM1P49642 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRIM1P49642 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
PRIM1P49642 AC138915.1-201ENST00000565427 1685 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PRIM1P49642 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRIM1P49642 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRIM1P49642 SNORD114-19-201ENST00000363072 75 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RNU6-647P-201ENST00000364243 107 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 U8.7-201ENST00000364940 136 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 SNORD18B-201ENST00000365659 72 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RNU6-32P-201ENST00000383948 107 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RNU6-13P-201ENST00000384248 107 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RNU6-12P-201ENST00000384604 107 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RNU6-136P-201ENST00000384663 107 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RNU6-19P-201ENST00000384718 107 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RNU6-41P-201ENST00000384741 107 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 MIR518C-201ENST00000384822 101 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RPS3P1-201ENST00000456781 192 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 RPS15AP11-201ENST00000594193 385 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 AP003357.1-201ENST00000604497 148 ntBASIC5.08□□□□□ -1.6
PRIM1P49642 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRIM1P49642 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PRIM1P49642 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRIM1P49642 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PRIM1P49642 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PRIM1P49642 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PRIM1P49642 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRIM1P49642 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PRIM1P49642 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
PRIM1P49642 RNU6-271P-201ENST00000363858 105 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms