Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
RFX3P48380 Y_RNA.504-201ENST00000384481 104 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC068050.1-201ENST00000394891 380 ntBASIC1.39□□□□□ -2.19
RFX3P48380 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
RFX3P48380 MTCO3P41-201ENST00000414801 328 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.39□□□□□ -2.19
RFX3P48380 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RFX3P48380 RNU6-1037P-201ENST00000459571 107 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC007547.1-201ENST00000462177 490 ntBASIC1.39□□□□□ -2.19
RFX3P48380 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC079140.3-201ENST00000511111 550 ntBASIC1.39□□□□□ -2.19
RFX3P48380 RNU6-1053P-201ENST00000515930 101 ntBASIC1.39□□□□□ -2.19
RFX3P48380 Y_RNA.688-201ENST00000516565 95 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.39□□□□□ -2.19
RFX3P48380 MIR5094-201ENST00000578766 85 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
RFX3P48380 AP001330.5-201ENST00000607176 411 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC064807.4-201ENST00000607201 407 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC090582.1-201ENST00000636321 199 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC068205.3-201ENST00000636385 468 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AL450472.1-202ENST00000637286 180 ntBASIC1.39□□□□□ -2.19
RFX3P48380 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.39□□□□□ -2.19
RFX3P48380 MTND5P10-201ENST00000603719 1809 ntBASIC1.38□□□□□ -2.19
RFX3P48380 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RFX3P48380 RNU6-438P-201ENST00000365561 103 ntBASIC1.38□□□□□ -2.19
RFX3P48380 RNU6-1042P-201ENST00000384204 107 ntBASIC1.38□□□□□ -2.19
RFX3P48380 Y_RNA.481-201ENST00000384373 102 ntBASIC1.38□□□□□ -2.19
RFX3P48380 MIR517C-201ENST00000385103 95 ntBASIC1.38□□□□□ -2.19
RFX3P48380 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
RFX3P48380 RNA5SP219-201ENST00000390940 113 ntBASIC1.38□□□□□ -2.19
RFX3P48380 SNORA12.2-201ENST00000391040 156 ntBASIC1.38□□□□□ -2.19
RFX3P48380 Y_RNA.595-201ENST00000410403 105 ntBASIC1.38□□□□□ -2.19
RFX3P48380 RNU4-55P-201ENST00000410731 137 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AL353193.1-201ENST00000421444 268 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.38□□□□□ -2.19
RFX3P48380 AL606489.2-201ENST00000433886 234 ntBASIC1.38□□□□□ -2.19
RFX3P48380 SNRPEP8-201ENST00000442866 260 ntBASIC1.38□□□□□ -2.19
RFX3P48380 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.38□□□□□ -2.19
RFX3P48380 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.38□□□□□ -2.19
RFX3P48380 RNU6-261P-201ENST00000459506 102 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AC091885.1-201ENST00000506658 268 ntBASIC1.38□□□□□ -2.19
RFX3P48380 CCDC34P1-201ENST00000507441 517 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AC097473.1-201ENST00000508142 408 ntBASIC1.38□□□□□ -2.19
RFX3P48380 RNU6-189P-201ENST00000516120 101 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AC006362.1-201ENST00000567392 174 ntBASIC1.38□□□□□ -2.19
RFX3P48380 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.38□□□□□ -2.19
RFX3P48380 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.38□□□□□ -2.19
RFX3P48380 VN1R80P-201ENST00000597126 338 ntBASIC1.38□□□□□ -2.19
RFX3P48380 Z98751.3-201ENST00000604447 521 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AC103705.1-201ENST00000619013 241 ntBASIC1.38□□□□□ -2.19
RFX3P48380 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.38□□□□□ -2.19
RFX3P48380 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.38□□□□□ -2.19
RFX3P48380 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.37□□□□□ -2.19
RFX3P48380 RNU6-457P-201ENST00000363999 107 ntBASIC1.37□□□□□ -2.19
RFX3P48380 SNORD116-9-201ENST00000384000 95 ntBASIC1.37□□□□□ -2.19
RFX3P48380 U8.10-201ENST00000384260 133 ntBASIC1.37□□□□□ -2.19
RFX3P48380 SNORD116-3-201ENST00000384287 95 ntBASIC1.37□□□□□ -2.19
RFX3P48380 SNORD116-7-201ENST00000384404 95 ntBASIC1.37□□□□□ -2.19
RFX3P48380 SNORD116-5-201ENST00000384462 95 ntBASIC1.37□□□□□ -2.19
RFX3P48380 RNU6-296P-201ENST00000384608 107 ntBASIC1.37□□□□□ -2.19
RFX3P48380 RN7SKP51-201ENST00000410781 304 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.37□□□□□ -2.19
RFX3P48380 AC007098.1-201ENST00000420122 367 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC012306.1-201ENST00000423267 114 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC139712.2-201ENST00000424302 339 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.37□□□□□ -2.19
RFX3P48380 AC092473.1-201ENST00000441098 221 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.37□□□□□ -2.19
RFX3P48380 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.37□□□□□ -2.19
RFX3P48380 AMD1P1-201ENST00000457220 922 ntBASIC1.37□□□□□ -2.19
RFX3P48380 RN7SKP210-201ENST00000459176 261 ntBASIC1.37□□□□□ -2.19
RFX3P48380 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
RFX3P48380 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC087854.1-201ENST00000519706 414 ntBASIC1.37□□□□□ -2.19
RFX3P48380 CENPUP1-201ENST00000526649 1202 ntBASIC1.37□□□□□ -2.19
RFX3P48380 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.37□□□□□ -2.19
RFX3P48380 SUB1P3-201ENST00000564581 315 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC009994.1-201ENST00000606889 253 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
RFX3P48380 AC073534.2-201ENST00000620377 381 ntBASIC1.37□□□□□ -2.19
RFX3P48380 MTND5P9-201ENST00000503854 1755 ntBASIC1.36□□□□□ -2.19
RFX3P48380 RNU6-1322P-201ENST00000364309 107 ntBASIC1.36□□□□□ -2.19
RFX3P48380 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
RFX3P48380 SNORD31B-201ENST00000364977 69 ntBASIC1.36□□□□□ -2.19
RFX3P48380 SNORA32.2-201ENST00000384049 122 ntBASIC1.36□□□□□ -2.19
RFX3P48380 RNU6-378P-201ENST00000384324 107 ntBASIC1.36□□□□□ -2.19
RFX3P48380 RNU6-174P-201ENST00000410406 106 ntBASIC1.36□□□□□ -2.19
RFX3P48380 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
RFX3P48380 ARL5AP1-201ENST00000418991 388 ntBASIC1.36□□□□□ -2.19
RFX3P48380 MTCO1P44-201ENST00000441935 243 ntBASIC1.36□□□□□ -2.19
RFX3P48380 SNRPGP13-201ENST00000442212 177 ntBASIC1.36□□□□□ -2.19
RFX3P48380 AL357134.1-201ENST00000445848 426 ntBASIC1.36□□□□□ -2.19
RFX3P48380 TPTE2P5-203ENST00000458118 728 ntBASIC1.36□□□□□ -2.19
RFX3P48380 AC087477.1-201ENST00000465747 340 ntBASIC1.36□□□□□ -2.19
RFX3P48380 AC083798.1-201ENST00000472671 131 ntBASIC1.36□□□□□ -2.19
RFX3P48380 AL163540.1-201ENST00000485382 386 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms