Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 SNORD1A-201ENST00000364968 72 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 MTCYBP2-201ENST00000407745 171 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 MIR1267-201ENST00000408723 78 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 RNU2-7P-201ENST00000410794 178 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 CST2P1-201ENST00000425770 87 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.94□□□□□ -2.26
COL18A1P39060 AC104850.1-201ENST00000435940 476 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 UBE2V1P8-201ENST00000437166 265 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.94□□□□□ -2.26
COL18A1P39060 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL18A1P39060 RNA5SP269-201ENST00000459032 137 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 AC079140.3-201ENST00000511111 550 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 RNU6-410P-201ENST00000517006 107 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 MRPS36P3-201ENST00000519284 130 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.94□□□□□ -2.26
COL18A1P39060 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.94□□□□□ -2.26
COL18A1P39060 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.94□□□□□ -2.26
COL18A1P39060 MIR5094-201ENST00000578766 85 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 AC091805.2-201ENST00000603848 235 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 SEPT14P19-203ENST00000633205 211 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL18A1P39060 SNORD33-201ENST00000362761 85 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 Y_RNA.132-201ENST00000363421 102 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 Y_RNA.255-201ENST00000364581 97 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 Y_RNA.471-201ENST00000384312 102 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 MIR508-201ENST00000384857 115 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.93□□□□□ -2.26
COL18A1P39060 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.93□□□□□ -2.26
COL18A1P39060 AL033528.1-201ENST00000453780 140 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.93□□□□□ -2.26
COL18A1P39060 RPL9P9-202ENST00000466501 579 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 SNRPGP7-201ENST00000469016 106 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC021146.2-201ENST00000504736 556 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.93□□□□□ -2.26
COL18A1P39060 SCARNA24.1-201ENST00000516465 137 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.93□□□□□ -2.26
COL18A1P39060 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL18A1P39060 AL160236.1-201ENST00000556317 195 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 MIR3941-201ENST00000582572 103 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC090578.1-201ENST00000604955 591 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC009159.2-201ENST00000617603 606 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AL627230.5-201ENST00000619807 58 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC097372.5-201ENST00000623665 376 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.93□□□□□ -2.26
COL18A1P39060 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL18A1P39060 RNU6-271P-201ENST00000363858 105 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 RPS3AP3-201ENST00000411933 242 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 C8orf59P1-201ENST00000429930 303 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 GPR143P-201ENST00000434155 205 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 MTND1P30-201ENST00000441241 901 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 EPS15P1-201ENST00000448836 336 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC013470.1-201ENST00000453438 462 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 ZNF114P1-201ENST00000453500 292 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC097473.1-201ENST00000508142 408 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC067942.3-201ENST00000512025 362 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 RNU6-902P-201ENST00000517212 91 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.93□□□□□ -2.26
COL18A1P39060 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.93□□□□□ -2.26
COL18A1P39060 SNORA77B-201ENST00000578179 125 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 MIR4775-201ENST00000581168 75 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC009229.3-201ENST00000608056 282 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC120349.3-201ENST00000624377 529 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 AC099654.13-201ENST00000639774 207 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 MTND4P12-201ENST00000498999 1377 ntBASIC0.93□□□□□ -2.26
COL18A1P39060 U3.9-201ENST00000363823 204 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 RNY4P34-201ENST00000364779 95 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 RNU6-108P-201ENST00000365558 107 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 RNU6-434P-201ENST00000384376 107 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 Y_RNA.560-201ENST00000384689 102 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 RNU6-550P-201ENST00000391057 101 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 RPS29P13-201ENST00000402041 169 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 RPL21P111-201ENST00000418453 477 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AL590135.1-201ENST00000422215 156 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AC019205.3-201ENST00000424573 156 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AC016700.2-201ENST00000446011 156 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.92□□□□□ -2.26
COL18A1P39060 AC015911.1-201ENST00000495111 156 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 RPS23P5-201ENST00000495419 428 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AC079140.2-201ENST00000506193 142 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.92□□□□□ -2.26
COL18A1P39060 SUMO2P18-201ENST00000518873 252 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 HMGB1P33-201ENST00000563485 527 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AC096720.1-201ENST00000604441 183 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AP001485.1-201ENST00000604799 199 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL18A1P39060 PCGEM1.1-201ENST00000613431 131 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 AL121890.5-201ENST00000620848 304 ntBASIC0.92□□□□□ -2.26
COL18A1P39060 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL18A1P39060 MTND4P14-201ENST00000435799 1354 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 AC092268.1-201ENST00000342691 405 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 RNU6-393P-201ENST00000384475 107 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 RNU6-939P-201ENST00000384634 107 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 MIR520A-201ENST00000384862 85 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 MIR454-201ENST00000390180 115 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.91□□□□□ -2.26
COL18A1P39060 MTCO1P21-201ENST00000416634 589 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.91□□□□□ -2.26
COL18A1P39060 AC139712.2-201ENST00000424302 339 ntBASIC0.91□□□□□ -2.26
COL18A1P39060 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms