Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.42□□□□□ -2.18
FDFT1P37268 AC015712.3-201ENST00000559380 164 ntBASIC1.42□□□□□ -2.18
FDFT1P37268 AC006362.1-201ENST00000567392 174 ntBASIC1.42□□□□□ -2.18
FDFT1P37268 AC090517.1-201ENST00000569307 266 ntBASIC1.42□□□□□ -2.18
FDFT1P37268 AC087683.1-201ENST00000591187 441 ntBASIC1.42□□□□□ -2.18
FDFT1P37268 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.42□□□□□ -2.18
FDFT1P37268 VN1R80P-201ENST00000597126 338 ntBASIC1.42□□□□□ -2.18
FDFT1P37268 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
FDFT1P37268 SNORA43.4-201ENST00000629559 138 ntBASIC1.42□□□□□ -2.18
FDFT1P37268 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
FDFT1P37268 Y_RNA.67-201ENST00000362870 100 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 RNU6-112P-201ENST00000363599 104 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 SNORA12.2-201ENST00000391040 156 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 RNU6-482P-201ENST00000391068 107 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 RNU1-78P-201ENST00000391248 165 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AC012306.1-201ENST00000423267 114 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.41□□□□□ -2.18
FDFT1P37268 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.41□□□□□ -2.18
FDFT1P37268 TPTE2P5-203ENST00000458118 728 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.41□□□□□ -2.18
FDFT1P37268 AC021146.2-201ENST00000504736 556 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AC097473.1-201ENST00000508142 408 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AC010486.3-201ENST00000511602 785 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 RNU6-237P-201ENST00000515985 71 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 SNORA14.1-201ENST00000516113 141 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 RNU6-1038P-201ENST00000516516 104 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AC026407.1-201ENST00000518369 204 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.41□□□□□ -2.18
FDFT1P37268 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.41□□□□□ -2.18
FDFT1P37268 MIR5094-201ENST00000578766 85 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AC090582.1-201ENST00000636321 199 ntBASIC1.41□□□□□ -2.18
FDFT1P37268 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.41□□□□□ -2.18
FDFT1P37268 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
FDFT1P37268 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
FDFT1P37268 MIR340-201ENST00000362125 95 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 Y_RNA.77-201ENST00000362962 107 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 RNU6-1026P-201ENST00000384465 108 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
FDFT1P37268 RNU4-55P-201ENST00000410731 137 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.4□□□□□ -2.19
FDFT1P37268 UBE2V1P8-201ENST00000437166 265 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 AC245517.4-201ENST00000448601 281 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.4□□□□□ -2.19
FDFT1P37268 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.4□□□□□ -2.19
FDFT1P37268 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 RNU6-1037P-201ENST00000459571 107 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 AC007547.1-201ENST00000462177 490 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 MTCO3P38-201ENST00000468910 766 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 AC108078.1-201ENST00000508073 725 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 RNU6-189P-201ENST00000516120 101 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 RNU6-612P-201ENST00000516909 102 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 AP003034.1-201ENST00000534621 422 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 MIR4424-201ENST00000585257 86 ntBASIC1.4□□□□□ -2.19
FDFT1P37268 ZNF72P-201ENST00000425869 1908 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 RNA5SP432-201ENST00000362480 116 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 SNORD31B-201ENST00000364977 69 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 RNU6-203P-201ENST00000384038 104 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 RNU6-1093P-201ENST00000391194 107 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 CDK8P2-201ENST00000415020 547 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.39□□□□□ -2.19
FDFT1P37268 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.39□□□□□ -2.19
FDFT1P37268 MTCO2P16-201ENST00000436962 677 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 RPS23P5-201ENST00000495419 428 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 RNA5SP401-201ENST00000515920 127 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 SUMO2P18-201ENST00000518873 252 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.39□□□□□ -2.19
FDFT1P37268 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.39□□□□□ -2.19
FDFT1P37268 AL158211.1-201ENST00000566763 763 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 AC009994.1-201ENST00000606889 253 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 AC064807.4-201ENST00000607201 407 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.39□□□□□ -2.19
FDFT1P37268 AL353997.5-201ENST00000618886 171 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 AL136221.1-201ENST00000621449 509 ntBASIC1.39□□□□□ -2.19
FDFT1P37268 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.39□□□□□ -2.19
FDFT1P37268 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
FDFT1P37268 RNU6-414P-201ENST00000363705 104 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 RNU6-296P-201ENST00000384608 107 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 Y_RNA.582-201ENST00000391023 95 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 MIR1267-201ENST00000408723 78 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 RPL21P111-201ENST00000418453 477 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
FDFT1P37268 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.38□□□□□ -2.19
FDFT1P37268 MTATP6P17-201ENST00000431030 672 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
FDFT1P37268 AC079140.3-201ENST00000511111 550 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 SNORA40.12-201ENST00000516329 111 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 SNORD60.2-201ENST00000516883 86 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 AC087854.1-201ENST00000519706 414 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 RNU6-323P-201ENST00000521915 107 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.38□□□□□ -2.19
FDFT1P37268 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.38□□□□□ -2.19
FDFT1P37268 AC092747.3-201ENST00000603769 301 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 RPL17P51-201ENST00000605218 238 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms